Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   H3L94_RS02220 Genome accession   NZ_CP059567
Coordinates   471693..472148 (+) Length   151 a.a.
NCBI ID   WP_182122485.1    Uniprot ID   A0A7D7T5R0
Organism   Neisseria shayeganii strain DSM 22244     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 466693..477148
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H3L94_RS02185 (H3L94_02185) - 466925..467296 (-) 372 WP_182122482.1 hypothetical protein -
  H3L94_RS02190 (H3L94_02190) - 467324..467575 (-) 252 WP_040660372.1 BolA family protein -
  H3L94_RS02195 (H3L94_02195) mnmE 467741..469102 (+) 1362 WP_182122483.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE -
  H3L94_RS02200 (H3L94_02200) - 469429..469785 (-) 357 WP_040660417.1 hypothetical protein -
  H3L94_RS02205 (H3L94_02205) - 470056..470412 (-) 357 WP_009119691.1 hypothetical protein -
  H3L94_RS02210 (H3L94_02210) - 470709..470894 (+) 186 WP_182123078.1 lipoprotein signal peptidase -
  H3L94_RS02215 (H3L94_02215) - 470993..471706 (+) 714 WP_182122484.1 phosphoglycolate phosphatase -
  H3L94_RS02220 (H3L94_02220) recX 471693..472148 (+) 456 WP_182122485.1 recombination regulator RecX Regulator
  H3L94_RS02225 (H3L94_02225) - 472251..472448 (-) 198 WP_182122486.1 hypothetical protein -
  H3L94_RS02230 (H3L94_02230) - 472618..472890 (+) 273 WP_009118696.1 type B 50S ribosomal protein L31 -
  H3L94_RS02235 (H3L94_02235) ykgO 472890..473015 (+) 126 WP_004283474.1 type B 50S ribosomal protein L36 -
  H3L94_RS02240 (H3L94_02240) - 473217..474698 (+) 1482 WP_182122487.1 FAD-linked oxidase C-terminal domain-containing protein -
  H3L94_RS02245 (H3L94_02245) - 474852..475670 (+) 819 WP_244958805.1 glycosyltransferase -
  H3L94_RS02250 (H3L94_02250) - 475683..476921 (+) 1239 WP_182122488.1 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase -

Sequence

Protein


Download         Length: 151 a.a.        Molecular weight: 17551.81 Da        Isoelectric Point: 8.9138

>NTDB_id=470769 H3L94_RS02220 WP_182122485.1 471693..472148(+) (recX) [Neisseria shayeganii strain DSM 22244]
MKPVKSLRARALAYLSRREMSKAELRRKLLPYAEETEEVDALLQELAERHWQSDSRYAESYVHGKSSRYGRLRLAKSLSQ
QGVDEETIAAVLPEPDAERQTACEVLRKKCKVPPTTPQEYARAQRFLAYRGFSGEHIRYALQHAWSEEDRE

Nucleotide


Download         Length: 456 bp        

>NTDB_id=470769 H3L94_RS02220 WP_182122485.1 471693..472148(+) (recX) [Neisseria shayeganii strain DSM 22244]
GTGAAGCCGGTTAAGTCGCTGCGCGCCAGGGCGTTGGCTTATTTGTCTCGGCGGGAAATGTCGAAGGCCGAATTGAGGCG
CAAGCTGTTGCCGTATGCCGAGGAAACGGAAGAGGTAGATGCCTTACTGCAGGAGTTGGCTGAGCGGCATTGGCAGTCGG
ACAGCCGTTATGCCGAGAGTTATGTGCACGGCAAAAGCAGTCGTTACGGCCGCTTGAGGCTGGCAAAAAGTTTGAGCCAA
CAGGGTGTGGATGAGGAAACCATTGCGGCGGTGTTGCCGGAACCCGATGCGGAGCGGCAGACGGCCTGCGAAGTGTTGCG
CAAAAAATGCAAAGTGCCGCCGACCACACCGCAAGAATATGCTCGTGCCCAGCGCTTTTTGGCCTACCGCGGTTTCTCCG
GCGAGCACATCCGCTATGCCTTGCAGCATGCCTGGAGTGAAGAGGACAGGGAATAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(35-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7D7T5R0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

52.703

98.013

0.517