Detailed information NTG0047076

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPPN135_RS07525
• Genome accession: NC_017379
• Coordinates: 1559364..1560803 (-)
• Length: 479 a.a.
• NCBI ID: WP_000751676.1
• Uniprot ID: -
• Organism: Helicobacter pylori Puno135
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1554364..1565803

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPPN135_RS07500 (HPPN135_07685)	recG	1555507..1557372 (-)	1866	WP_001158384.1	ATP-dependent DNA helicase RecG	-
HPPN135_RS07505 (HPPN135_07690)	-	1557454..1557798 (+)	345	WP_000837013.1	hypothetical protein	-
HPPN135_RS07510 (HPPN135_07695)	-	1557802..1558437 (+)	636	WP_000649617.1	outer membrane protein	-
HPPN135_RS07515 (HPPN135_07700)	-	1558434..1559186 (-)	753	WP_000767497.1	exodeoxyribonuclease III	-
HPPN135_RS07525 (HPPN135_07705)	comH	1559364..1560803 (-)	1440	WP_000751676.1	hypothetical protein	Machinery gene
HPPN135_RS07530 (HPPN135_07710)	dnaA	1561037..1562404 (-)	1368	WP_000380569.1	chromosomal replication initiator protein DnaA	-
HPPN135_RS07535 (HPPN135_07715)	-	1562556..1563092 (+)	537	WP_000922948.1	purine-nucleoside phosphorylase	-
HPPN135_RS07540 (HPPN135_07720)	-	1563139..1563378 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HPPN135_RS07545 (HPPN135_07725)	glmS	1563379..1565172 (+)	1794	WP_000334359.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54918.89 Da
• Isoelectric Point: 7.3772

>NTDB_id=47076 HPPN135_RS07525 WP_000751676.1 1559364..1560803(-) (comH) [Helicobacter pylori Puno135]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRSTQIVFSSKELKELNPHQMPSLNAPIQKPQNKPTSSQQPLQNFSYPESKLGSKNPKNSLLQPL
ATPNKTSLANEVKTPTNDTKPPLKHSSEDQENNLFVTPPTEKTLPNNTPNADINERNESNENKDNAQKQAVRDPNVREFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARTRKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQTEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=47076 HPPN135_RS07525 WP_000751676.1 1559364..1560803(-) (comH) [Helicobacter pylori Puno135]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCTAGAAGCACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTAAACCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTTCATCGC
AACAACCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCCTAATAAAACAAGCCTCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTTTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ATGAACGCAATGAAAGCAATGAGAATAAGGATAATGCGCAAAAACAAGCCGTTAGAGATCCTAATGTTAGAGAATTTGCA
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCAACAGACATTACCCCTTGTGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTCCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCCAGAACACGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAACAGAGCCGACTTTCTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.484	100	0.925