Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   H3L95_RS06825 Genome accession   NZ_CP059566
Coordinates   1409891..1410361 (+) Length   156 a.a.
NCBI ID   WP_040669063.1    Uniprot ID   -
Organism   Neisseria sicca strain DSM 17713     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1404891..1415361
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H3L95_RS06805 (H3L95_06805) - 1405576..1406583 (-) 1008 WP_182096240.1 IS5 family transposase -
  H3L95_RS06810 (H3L95_06810) - 1406664..1407434 (-) 771 WP_003761428.1 sulfite exporter TauE/SafE family protein -
  H3L95_RS06815 (H3L95_06815) - 1407861..1408325 (+) 465 WP_003764370.1 Lrp/AsnC ligand binding domain-containing protein -
  H3L95_RS06820 (H3L95_06820) - 1408980..1409690 (+) 711 WP_003761418.1 phosphoglycolate phosphatase -
  H3L95_RS06825 (H3L95_06825) recX 1409891..1410361 (+) 471 WP_040669063.1 recombination regulator RecX Regulator
  H3L95_RS06830 (H3L95_06830) - 1410436..1410597 (+) 162 WP_009311625.1 hypothetical protein -
  H3L95_RS06835 (H3L95_06835) - 1410792..1411397 (-) 606 WP_003761411.1 DUF4112 domain-containing protein -
  H3L95_RS06840 (H3L95_06840) - 1411605..1412726 (-) 1122 WP_003761407.1 DUF6396 domain-containing protein -
  H3L95_RS06845 (H3L95_06845) - 1412899..1414008 (-) 1110 WP_003761405.1 DUF6396 domain-containing protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 18109.41 Da        Isoelectric Point: 9.2435

>NTDB_id=470734 H3L95_RS06825 WP_040669063.1 1409891..1410361(+) (recX) [Neisseria sicca strain DSM 17713]
MKPQKSLRARAMDILSRKEISRVGLKRKLAPYAESEEELENVLDEFAERNWQSDQRYAEAYIHSKSRQHGSLRLKQALTQ
QGIGETVSREFMPDKSSELQTAVAVLRKKFKQPAADLKDKQKQARFLAYRGFDMDTIHAALKNSWDEDDVFEYGEN

Nucleotide


Download         Length: 471 bp        

>NTDB_id=470734 H3L95_RS06825 WP_040669063.1 1409891..1410361(+) (recX) [Neisseria sicca strain DSM 17713]
ATGAAACCCCAAAAATCCCTGCGCGCCCGCGCGATGGACATTCTTTCCCGAAAGGAAATCAGCCGTGTCGGACTCAAACG
CAAGCTCGCCCCGTATGCCGAAAGCGAAGAAGAATTGGAAAACGTGTTGGACGAATTTGCCGAACGCAACTGGCAATCCG
ACCAACGCTACGCCGAAGCCTACATCCACAGCAAAAGCCGCCAACACGGTTCCCTGCGTCTGAAACAGGCATTGACGCAG
CAAGGCATAGGCGAAACCGTCAGCCGCGAATTTATGCCCGACAAATCGAGCGAACTGCAAACCGCCGTCGCCGTGTTGCG
CAAAAAATTCAAACAGCCCGCCGCCGATTTGAAAGACAAGCAAAAACAAGCGCGCTTCCTCGCATATCGCGGCTTCGATA
TGGACACCATCCACGCCGCGCTCAAAAACAGTTGGGATGAAGATGATGTTTTTGAATACGGAGAAAATTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(35-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

80.405

94.872

0.763