Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   H3L96_RS06350 Genome accession   NZ_CP059565
Coordinates   1355315..1357354 (+) Length   679 a.a.
NCBI ID   WP_009116035.1    Uniprot ID   G4CP83
Organism   Neisseria wadsworthii strain DSM 22245     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1350315..1362354
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H3L96_RS06325 (H3L96_06315) - 1351884..1352660 (+) 777 WP_009116031.1 ferredoxin--NADP reductase -
  H3L96_RS06330 (H3L96_06320) - 1352804..1353811 (-) 1008 WP_182073116.1 IS5 family transposase -
  H3L96_RS06335 (H3L96_06325) - 1354014..1354268 (+) 255 WP_009116032.1 type II toxin-antitoxin system HicA family toxin -
  H3L96_RS06340 (H3L96_06330) - 1354265..1354600 (+) 336 WP_009116033.1 type II toxin-antitoxin system HicB family antitoxin -
  H3L96_RS06345 (H3L96_06335) - 1354766..1355227 (+) 462 WP_009116034.1 HAD domain-containing protein -
  H3L96_RS06350 (H3L96_06340) recG 1355315..1357354 (+) 2040 WP_009116035.1 ATP-dependent DNA helicase RecG Machinery gene
  H3L96_RS06355 (H3L96_06345) - 1357544..1358821 (+) 1278 WP_009116037.1 hypothetical protein -
  H3L96_RS06360 (H3L96_06350) - 1358996..1359745 (-) 750 WP_009116038.1 amino acid ABC transporter permease -
  H3L96_RS06365 (H3L96_06355) ribF 1359975..1360910 (+) 936 WP_009116039.1 bifunctional riboflavin kinase/FAD synthetase -

Sequence

Protein


Download         Length: 679 a.a.        Molecular weight: 74891.85 Da        Isoelectric Point: 7.9418

>NTDB_id=470701 H3L96_RS06350 WP_009116035.1 1355315..1357354(+) (recG) [Neisseria wadsworthii strain DSM 22245]
MTPETKKLLKITDTAAQKLEKLDLHSAWDVVLHLPLRYEDETHITPIADAPLGVPCQVEGVVVRQDVQFKPRKQLIVQIR
DDAGKVLFLRFIHFYASTQKQLAQGRRVRAVGEIKHGFFGNEMIHPKIRDAENTGLSESLTPVYPTVNGLNQPTLRRIIQ
TALDAVSLHDTLPDALLSELKLPGLAESLRLLHAPPPEYSITRLADGALPAWQRLKFDELLAQQLSMRLARQKRINGQAK
PLRGDGSLSGKLLANLPFGLTGAQKRVLDEIRSDMRQPHPMHRLLQGDVGSGKTIVAALSALTAVEAGFQVAVMAPTEIL
AEQHYMKFKQWFGALGLDVAWLTGSGRKKMKEQTKALLESGGVKIAVGTHALFQDDVQFQNLGLVIVDEQHRFGVAQRLA
LKNKGQDVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPVKTRLVNSLRRAEVEQFVLGTCEKGQQAYWVCPLIE
ESETLQLQTAVDTQLELQQALPMLNVGLLHGKMKAAEKAAVMEDFSAGKIHVLVATTVIEVGVDVPNASLMVIEHAERMG
LSQLHQLRGRVGRGAAASSCVLLFAEPLSELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFADLEED
MRLLELARDIAPKLIAGQPDIVDAHLARWLGSREGYLGV

Nucleotide


Download         Length: 2040 bp        

>NTDB_id=470701 H3L96_RS06350 WP_009116035.1 1355315..1357354(+) (recG) [Neisseria wadsworthii strain DSM 22245]
ATGACGCCTGAAACAAAAAAACTGCTGAAAATCACGGATACCGCTGCGCAGAAGCTGGAGAAGCTCGATTTGCACAGCGC
GTGGGACGTGGTGCTGCATTTGCCGCTGCGTTATGAAGATGAAACGCATATTACGCCGATTGCGGATGCGCCTTTGGGTG
TGCCTTGCCAAGTTGAAGGTGTGGTAGTGCGGCAGGATGTTCAGTTTAAGCCGCGTAAGCAGCTGATTGTGCAGATTCGG
GATGATGCGGGCAAAGTGTTGTTTTTGCGGTTTATTCATTTTTATGCCAGCACCCAGAAGCAGCTGGCGCAGGGGCGGCG
GGTGCGTGCGGTGGGGGAAATCAAGCACGGGTTTTTCGGCAACGAGATGATTCACCCGAAAATCAGGGATGCGGAAAACA
CAGGCCTGTCTGAAAGCCTCACGCCGGTTTATCCCACGGTAAACGGTCTGAACCAGCCCACTTTGCGCCGCATCATTCAA
ACGGCGCTTGATGCGGTGTCGCTGCATGATACTTTGCCGGACGCTTTATTATCCGAATTGAAGCTGCCCGGCCTGGCCGA
AAGCCTGCGTCTGTTGCATGCACCGCCGCCGGAATACAGCATCACGCGCTTGGCCGACGGTGCTTTGCCTGCGTGGCAGC
GGTTGAAGTTTGATGAATTGCTGGCGCAGCAGCTATCCATGCGGCTCGCCCGCCAAAAGCGCATCAACGGGCAGGCGAAA
CCTTTGCGCGGCGACGGCAGCCTGAGCGGTAAGCTGTTGGCAAATCTGCCGTTTGGGTTGACCGGCGCGCAAAAGCGGGT
GTTGGACGAAATCCGCTCGGATATGCGGCAGCCGCACCCGATGCACCGCCTGCTGCAAGGCGATGTGGGCAGCGGGAAAA
CCATTGTGGCGGCTTTATCTGCGCTGACTGCGGTTGAAGCCGGCTTCCAGGTGGCGGTAATGGCGCCCACCGAAATTCTG
GCCGAGCAGCATTATATGAAGTTCAAACAATGGTTTGGCGCTTTGGGTTTGGACGTGGCCTGGCTCACGGGCAGCGGGCG
CAAGAAAATGAAAGAGCAAACCAAAGCCTTGCTGGAAAGCGGCGGCGTCAAGATAGCGGTTGGCACGCATGCTTTGTTTC
AAGACGATGTGCAGTTTCAGAATTTGGGCTTGGTGATTGTGGACGAGCAGCACCGTTTCGGCGTGGCGCAGCGTTTGGCC
TTGAAAAACAAAGGGCAGGATGTGCACCAGCTGATGATGTCGGCCACGCCGATTCCGCGCACGCTGGCCATGAGCTTTTT
TGCCGACTTGGATGTGTCGGTGATTGACGAGCTGCCGCCGGGGCGCACACCGGTGAAAACCCGTTTGGTCAACAGCTTGC
GGCGCGCGGAAGTGGAGCAGTTTGTGCTCGGCACCTGTGAAAAAGGGCAGCAGGCATATTGGGTGTGCCCCCTGATTGAG
GAAAGTGAAACGCTACAGCTGCAAACCGCGGTGGACACGCAGCTTGAGCTGCAACAGGCCTTGCCCATGCTGAACGTAGG
TTTGCTGCACGGAAAAATGAAAGCGGCGGAAAAGGCGGCCGTGATGGAAGATTTTTCTGCGGGCAAAATTCATGTGCTGG
TGGCGACCACGGTTATCGAAGTGGGCGTGGACGTGCCGAATGCCAGCCTGATGGTGATTGAGCATGCCGAGCGCATGGGT
TTGTCGCAGTTGCACCAGTTGCGCGGCAGGGTGGGGCGCGGCGCGGCGGCGAGCAGCTGCGTGCTCTTGTTTGCAGAGCC
TTTGAGCGAGCTGGCCAAAGCGCGCTTGAAAGTGATTTACGAGCATACCGACGGCTTTGAAATCGCCCGCCAGGATTTGA
ATATCCGCGGGCCGGGTGAGTTTCTCGGTGCGCGGCAGAGCGGGGTGCCGATGCTGCGTTTTGCCGATTTGGAAGAAGAC
ATGCGCCTGCTGGAATTGGCACGCGATATTGCGCCGAAACTGATTGCCGGGCAGCCGGATATTGTGGATGCGCATCTGGC
TAGATGGCTGGGCAGCCGCGAAGGTTATTTGGGTGTGTAG

Domains

Predicted by InterproScan.

Helicase conserved C-terminal domain (Helicase_C)

(467-574)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(603-663)

RecG wedge domain (RecG_wedge)

(12-165)

DEAD/DEAH box helicase (DEAD)

(282-418)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4CP83

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

79.381

100

0.794