Detailed information NTG0470666

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: H3L97_RS03085
• Genome accession: NZ_CP059564
• Coordinates: 603055..604515 (-)
• Length: 486 a.a.
• NCBI ID: WP_224446408.1
• Uniprot ID: -
• Organism: Alysiella filiformis strain DSM 16848
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 598055..609515

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H3L97_RS03075 (H3L97_03075)	-	601186..602184 (-)	999	WP_224446400.1	ABC transporter ATP-binding protein	-
H3L97_RS03080 (H3L97_03080)	-	602309..602992 (+)	684	WP_097114652.1	energy-coupling factor ABC transporter permease	-
H3L97_RS03085 (H3L97_03085)	pilA	603055..604515 (-)	1461	WP_224446408.1	signal recognition particle-docking protein FtsY	Machinery gene
H3L97_RS03090 (H3L97_03090)	pdxA	605279..606277 (-)	999	WP_097114651.1	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	-
H3L97_RS03095 (H3L97_03095)	argF	606559..607569 (-)	1011	WP_097114650.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 486 a.a.
• Molecular weight: 51529.01 Da
• Isoelectric Point: 4.4105

>NTDB_id=470666 H3L97_RS03085 WP_224446408.1 603055..604515(-) (pilA) [Alysiella filiformis strain DSM 16848]
METSWTFGGKKPETPNENESQTPESATEPVSHWTFGGADVNTHTDDVIHIDPKKLSPTTKALIDEALGRLPENRAALVGK
LDEDDLAPPPAAEAATDVDASESHTSVEASPETPTVANATPNPPAHEPLAAEAATDVDETNPSLPEQAIQPADDIAQRDV
GDVPIVAAAAATVLASDNDDAAPQDSWASRLARGLSKSRDKMAKSLAGVFGGGQIDEDLYEELETVLITSDMGIEATEML
MKEVRNRVSLKGLKDGNELRQALKDAVYDLLKPLEQPLTLPENGQPFVIMMAGINGAGKTTSIGKLAKYFQSQGKSVILA
AGDTFRAAAREQLQEWGERNGVTVISQVKGDSAAVCFDAVEAAKARKIDVVLADTAGRLPTQLHLMEEIAKVKRVLQKAM
PDAPHEILLVLDANIGQNALNQVGAFHKALGITGLIVTKLDGTAKGGVLAALASQYPIPVRYVGVGEGIDDLRPFKARDF
VDALLD

Nucleotide

• Length: 1461 bp

>NTDB_id=470666 H3L97_RS03085 WP_224446408.1 603055..604515(-) (pilA) [Alysiella filiformis strain DSM 16848]
ATTGAAACCAGTTGGACTTTTGGCGGCAAAAAACCCGAAACGCCCAACGAAAACGAATCCCAAACGCCTGAATCGGCTAC
CGAACCCGTGAGCCATTGGACGTTTGGCGGCGCAGATGTGAACACCCACACCGATGATGTGATTCACATTGACCCCAAAA
AATTGTCGCCCACCACCAAGGCTTTGATTGATGAAGCCTTGGGCAGGCTGCCTGAAAACCGTGCCGCATTGGTGGGCAAA
TTGGACGAAGACGACCTCGCCCCACCCCCAGCAGCCGAAGCCGCCACCGATGTGGACGCAAGCGAATCCCACACCAGCGT
TGAGGCTAGCCCTGAAACGCCCACCGTTGCCAACGCAACACCCAATCCACCCGCACACGAACCCCTCGCTGCCGAAGCCG
CCACCGATGTGGACGAAACCAACCCCAGCCTGCCTGAACAAGCCATTCAGCCAGCCGATGACATTGCCCAACGCGATGTG
GGCGATGTGCCGATTGTTGCCGCCGCAGCCGCCACCGTGTTGGCAAGCGACAACGATGACGCGGCACCGCAAGACAGTTG
GGCAAGCCGCTTGGCGCGTGGATTGAGCAAATCGCGCGACAAAATGGCAAAATCGCTGGCAGGCGTGTTTGGTGGTGGTC
AAATTGACGAAGATTTGTATGAAGAATTGGAAACCGTGCTGATTACCAGCGACATGGGCATTGAAGCCACCGAAATGCTG
ATGAAAGAAGTCCGCAATCGCGTTTCGCTCAAAGGCTTGAAAGACGGCAACGAATTGCGTCAAGCCCTCAAAGACGCGGT
GTACGATTTGCTTAAACCTTTGGAACAGCCGCTCACGCTGCCTGAAAATGGTCAGCCCTTTGTGATTATGATGGCGGGCA
TTAACGGTGCGGGCAAAACCACGTCCATTGGCAAATTGGCAAAATATTTCCAATCGCAAGGCAAAAGCGTGATTTTGGCG
GCTGGCGACACCTTCCGTGCTGCCGCGCGTGAGCAGTTGCAAGAATGGGGCGAACGCAATGGCGTTACCGTCATTTCCCA
AGTCAAAGGCGACAGCGCGGCGGTGTGCTTTGACGCAGTAGAAGCCGCCAAAGCGCGAAAAATTGACGTGGTTTTGGCAG
ACACGGCAGGGCGTTTGCCCACCCAGTTGCATTTGATGGAGGAGATTGCCAAAGTCAAACGTGTTTTGCAAAAAGCCATG
CCCGATGCGCCACACGAAATTTTGCTGGTGTTGGACGCCAACATCGGTCAAAACGCTTTGAATCAAGTGGGGGCGTTTCA
CAAGGCATTGGGGATAACGGGCTTAATCGTAACCAAGCTGGACGGCACCGCCAAAGGTGGGGTGTTGGCGGCATTGGCAA
GTCAATATCCCATACCCGTGCGCTATGTGGGCGTGGGCGAGGGCATAGACGATTTGCGCCCCTTTAAAGCGCGTGATTTT
GTGGACGCGCTGTTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (201-266)

• SRP54-type protein, GTPase domain (SRP54) (286-485)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	74.294	72.84	0.541