Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ToN1_RS08750 Genome accession   NZ_CP059560
Coordinates   1910116..1910511 (+) Length   131 a.a.
NCBI ID   WP_169127401.1    Uniprot ID   -
Organism   Aromatoleum petrolei strain ToN1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1905116..1915511
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ToN1_RS08730 (ToN1_17900) mgtE 1905279..1906721 (+) 1443 WP_169208400.1 magnesium transporter -
  ToN1_RS08735 (ToN1_17910) hemL 1906785..1908068 (-) 1284 WP_169208401.1 glutamate-1-semialdehyde 2,1-aminomutase -
  ToN1_RS08740 (ToN1_17920) thiE 1908129..1908773 (-) 645 WP_169208402.1 thiamine phosphate synthase -
  ToN1_RS08745 (ToN1_17930) - 1908754..1909716 (-) 963 WP_210148065.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  ToN1_RS08750 (ToN1_17950) pilG 1910116..1910511 (+) 396 WP_169127401.1 response regulator Regulator
  ToN1_RS08755 (ToN1_17960) - 1910528..1910893 (+) 366 WP_169127403.1 response regulator -
  ToN1_RS08760 (ToN1_17970) - 1910900..1911415 (+) 516 WP_169208403.1 chemotaxis protein CheW -
  ToN1_RS08765 (ToN1_17980) - 1911483..1913618 (+) 2136 WP_169208404.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14251.56 Da        Isoelectric Point: 7.2436

>NTDB_id=470620 ToN1_RS08750 WP_169127401.1 1910116..1910511(+) (pilG) [Aromatoleum petrolei strain ToN1]
MDLTGLKVMVIDDSNTIRRSAEIFLTNSGCQVLLAEDGFDALAKIADHHPDVIFVDIMMPRLDGYQTCALIKKNPQLAAT
PVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLKAVATHAARKAGTGL

Nucleotide


Download         Length: 396 bp        

>NTDB_id=470620 ToN1_RS08750 WP_169127401.1 1910116..1910511(+) (pilG) [Aromatoleum petrolei strain ToN1]
ATGGATCTGACCGGACTCAAGGTGATGGTGATCGACGACAGCAACACCATCCGCCGCAGCGCCGAGATTTTTCTCACCAA
CTCGGGCTGCCAGGTACTGCTGGCGGAAGACGGCTTCGACGCGCTCGCGAAGATCGCCGACCATCATCCCGACGTGATCT
TCGTCGACATCATGATGCCGCGCCTCGACGGCTACCAGACCTGCGCGCTGATCAAGAAGAATCCGCAGCTCGCCGCGACC
CCGGTGATCATGCTGTCATCGAAGGACGGCCTGTTCGACCGCGCACGCGGCCGCATGGTCGGCTCCGACGAATACCTCAC
CAAGCCCTTCACCAAGGACAGCCTGCTCAAGGCAGTCGCCACCCATGCCGCGCGCAAGGCCGGCACGGGTCTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

67.213

93.13

0.626