Detailed information NTG0047054

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPPN120_RS07230
• Genome accession: NC_017378
• Coordinates: 1511717..1513156 (-)
• Length: 479 a.a.
• NCBI ID: WP_000751675.1
• Uniprot ID: -
• Organism: Helicobacter pylori Puno120
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1506717..1518156

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPPN120_RS07205 (HPPN120_07475)	recG	1507844..1509715 (-)	1872	WP_001158378.1	ATP-dependent DNA helicase RecG	-
HPPN120_RS07210 (HPPN120_07480)	-	1509797..1510150 (+)	354	WP_000836996.1	hypothetical protein	-
HPPN120_RS07215 (HPPN120_07485)	-	1510154..1510789 (+)	636	WP_000649618.1	outer membrane protein	-
HPPN120_RS07220 (HPPN120_07490)	-	1510786..1511538 (-)	753	WP_000767492.1	exodeoxyribonuclease III	-
HPPN120_RS07230 (HPPN120_07495)	comH	1511717..1513156 (-)	1440	WP_000751675.1	hypothetical protein	Machinery gene
HPPN120_RS07235 (HPPN120_07500)	dnaA	1513421..1514788 (-)	1368	WP_000380570.1	chromosomal replication initiator protein DnaA	-
HPPN120_RS07240 (HPPN120_07505)	-	1514942..1515478 (+)	537	WP_000922942.1	purine-nucleoside phosphorylase	-
HPPN120_RS07245 (HPPN120_07510)	-	1515525..1515764 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HPPN120_RS07250 (HPPN120_07515)	glmS	1515765..1517558 (+)	1794	WP_000334331.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54891.90 Da
• Isoelectric Point: 7.6683

>NTDB_id=47054 HPPN120_RS07230 WP_000751675.1 1511717..1513156(-) (comH) [Helicobacter pylori Puno120]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRSTQIVFSSKELKELHPHQIPSLNAPIQKPQNKPTSSQQPLQNFSYPESKLGSKNPKNSLLQPL
ATPNKTSLANEVKTPTNDTKPPLRHSSEDQENNLFVTPPTEKTLPNNTPNADINERNESNENKDNVQKQAVRDPNVREFA
CGKWVYDDENLQAYRPSILKRVDEGKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQTEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=47054 HPPN120_RS07230 WP_000751675.1 1511717..1513156(-) (comH) [Helicobacter pylori Puno120]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAGCACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTACACCCGCACCAAATACCTTCTTTAAACGCACCCATACAAAAACCACAAAACAAACCCACTTCATCGC
AACAACCTCTTCAAAACTTTTCTTATCCAGAATCCAAACTAGGCTCTAAAAACCCTAAAAACAGTCTTTTACAGCCTTTA
GCCACTCCTAATAAAACAAGCCTCGCTAATGAAGTTAAAACGCCAACAAACGACACCAAACCCCCTTTAAGGCATTCTTC
AGAAGATCAAGAAAACAACCTTTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ATGAACGCAATGAAAGCAATGAGAATAAGGATAATGTGCAAAAACAAGCCGTTAGAGATCCTAATGTTAGAGAATTTGCG
TGCGGAAAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGGCAAACA
GACTGCAACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTCCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCACGAAAAGACGGCACGACTAGGCAATGTTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGTCCCAAACAAGACGATC
AAACAGAGCCGACTTTCTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACACGCAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAAGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.484	100	0.925