Detailed information NTG0470536

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: H2788_RS10505
• Genome accession: NZ_CP059550
• Coordinates: 2230499..2231314 (-)
• Length: 271 a.a.
• NCBI ID: WP_347016112.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain E-022166
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2225499..2236314

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H2788_RS10475 (H2788_10410)	-	2225807..2226247 (-)	441	WP_107973453.1	SRPBCC family protein	-
H2788_RS10480 (H2788_10415)	tadA	2226321..2226821 (-)	501	WP_198071116.1	tRNA adenosine(34) deaminase TadA	-
H2788_RS10485 (H2788_10420)	-	2226829..2227953 (-)	1125	WP_019458997.1	enoyl-CoA hydratase/isomerase family protein	-
H2788_RS10490 (H2788_10425)	ung	2227950..2228663 (-)	714	WP_347016109.1	uracil-DNA glycosylase	-
H2788_RS10495 (H2788_10430)	-	2228714..2229310 (-)	597	WP_347016110.1	6-carboxytetrahydropterin synthase	-
H2788_RS10500 (H2788_10435)	gspK	2229540..2230499 (-)	960	WP_347016111.1	type II secretion system minor pseudopilin GspK	-
H2788_RS10505 (H2788_10440)	xcpW	2230499..2231314 (-)	816	WP_347016112.1	type II secretion system minor pseudopilin GspJ	Machinery gene
H2788_RS10510 (H2788_10445)	xcpV	2231314..2231694 (-)	381	WP_019458993.1	type II secretion system minor pseudopilin GspI	Machinery gene
H2788_RS10515 (H2788_10450)	-	2231684..2232235 (-)	552	WP_347016113.1	type II secretion system protein	-
H2788_RS10520 (H2788_10455)	-	2232245..2232853 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
H2788_RS10525 (H2788_10460)	-	2232891..2233664 (-)	774	WP_347016114.1	TatD family hydrolase	-
H2788_RS10530 (H2788_10465)	-	2233682..2234023 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
H2788_RS10535 (H2788_10470)	-	2234036..2235016 (-)	981	WP_347016115.1	DNA polymerase III subunit delta'	-
H2788_RS10540 (H2788_10475)	kdsB	2235028..2235789 (-)	762	WP_191106485.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30594.76 Da
• Isoelectric Point: 8.8971

>NTDB_id=470536 H2788_RS10505 WP_347016112.1 2230499..2231314(-) (xcpW) [Acinetobacter seifertii strain E-022166]
MIKNKYFCTRSKVSRLAAGSDVVTTDCSEHSSSSYAQTKHCFSDSYTRNTVSHLAARSSSARLVRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNTEHEVHLFELQDTYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDADQKKLYRLKYTNLNTSNNEQPLSSTLLSQVDQYQVMVLTPQEVTKWPEVNIDSTKPNELKKLPKG
IKIQVTVAGVSYEWIYSLNQSNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=470536 H2788_RS10505 WP_347016112.1 2230499..2231314(-) (xcpW) [Acinetobacter seifertii strain E-022166]
ATGATAAAAAATAAGTACTTTTGCACCCGAAGCAAAGTTTCACGTCTTGCAGCTGGATCAGACGTTGTAACGACTGACTG
CTCAGAGCATAGCTCTTCGTCTTACGCTCAGACAAAGCACTGTTTTAGTGATTCTTACACTCGAAATACTGTTTCTCATC
TTGCGGCGCGATCGAGCAGTGCTCGATTAGTTCGCGCCTCAGGATTTACGTTGGTTGAGTTATTGGTTGCGATTGCTATT
TTCGCGGTTTTATCTTTATTGGGATGGAAAATATTCGATTATTTGCTTAAGGTCCGTGATCGTAACACCGAACATGAAGT
GCATTTATTTGAATTACAAGATACTTATCAACAAATTCTTCGTGATACTCTGCAAATTATTCCTTTATCTGCAAATCAAG
GTGGGCAACTTCATCCAGCTTTAGAAATCGATAATCAAATTTTACGTTTTAGCAAAGCAGGCGTAACTGATCCTTTAAAA
CAGGGGTTATCACCATTTGAACGAATTGAATATCGTTATGATGCTGACCAAAAAAAACTATATCGTCTTAAATATACAAA
TTTAAATACTTCGAATAACGAGCAACCTTTATCAAGTACCTTACTAAGTCAAGTTGACCAATATCAGGTTATGGTCTTAA
CTCCGCAAGAAGTAACAAAATGGCCCGAAGTTAATATTGATTCAACAAAACCTAACGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAAGTTACAGTAGCGGGAGTAAGTTATGAGTGGATCTATAGCTTGAATCAAAGCAATTTAGCACTTTCCCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	91.593	83.395	0.764