Detailed information NTG0470496

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: H2789_RS10300
• Genome accession: NZ_CP059549
• Coordinates: 2180097..2180798 (-)
• Length: 233 a.a.
• NCBI ID: WP_347018382.1
• Uniprot ID: -
• Organism: Acinetobacter calcoaceticus strain NCIMB13260
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2175097..2185798

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H2789_RS10270 (H2789_10265)	-	2175408..2175848 (-)	441	WP_056479630.1	SRPBCC family protein	-
H2789_RS10275 (H2789_10270)	tadA	2175919..2176422 (-)	504	WP_347018380.1	tRNA adenosine(34) deaminase TadA	-
H2789_RS10280 (H2789_10275)	-	2176428..2177552 (-)	1125	WP_003651483.1	enoyl-CoA hydratase/isomerase family protein	-
H2789_RS10285 (H2789_10280)	ung	2177549..2178262 (-)	714	WP_005041081.1	uracil-DNA glycosylase	-
H2789_RS10290 (H2789_10285)	-	2178312..2178908 (-)	597	WP_003651480.1	6-carboxytetrahydropterin synthase	-
H2789_RS10295 (H2789_10290)	gspK	2179138..2180097 (-)	960	WP_347018381.1	type II secretion system minor pseudopilin GspK	-
H2789_RS10300 (H2789_10295)	xcpW	2180097..2180798 (-)	702	WP_347018382.1	type II secretion system minor pseudopilin GspJ	Machinery gene
H2789_RS10305 (H2789_10300)	xcpV	2180798..2181178 (-)	381	WP_347018383.1	type II secretion system minor pseudopilin GspI	Machinery gene
H2789_RS10310 (H2789_10305)	-	2181168..2181722 (-)	555	WP_347018384.1	type II secretion system protein	-
H2789_RS10315 (H2789_10310)	-	2181732..2182340 (-)	609	WP_347020219.1	TetR/AcrR family transcriptional regulator	-
H2789_RS10320 (H2789_10315)	-	2182377..2183150 (-)	774	WP_003651468.1	TatD family hydrolase	-
H2789_RS10325 (H2789_10320)	-	2183168..2183509 (-)	342	WP_003651467.1	PilZ domain-containing protein	-
H2789_RS10330 (H2789_10325)	-	2183520..2184500 (-)	981	WP_347018385.1	DNA polymerase III subunit delta'	-
H2789_RS10335 (H2789_10330)	kdsB	2184514..2185275 (-)	762	WP_347018386.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26704.70 Da
• Isoelectric Point: 10.0473

>NTDB_id=470496 H2789_RS10300 WP_347018382.1 2180097..2180798(-) (xcpW) [Acinetobacter calcoaceticus strain NCIMB13260]
MIKNKYFRSRSTASRLTARSNRARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAQHEVQLFELQDAYQQ
VLRDTLQIIPLSANQGGQLHPALELDNQVLYFSKAGVTDPLKQGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLS
STLLSQVEQFQIMVLTPQEVTKWPEINIDPTKPEEFRKLPKGIKIQLTVAGVSYEWIYSLNQGNLSLSKQGGA

Nucleotide

• Length: 702 bp

>NTDB_id=470496 H2789_RS10300 WP_347018382.1 2180097..2180798(-) (xcpW) [Acinetobacter calcoaceticus strain NCIMB13260]
ATGATAAAAAATAAATATTTTCGCTCTCGAAGCACAGCTTCACGTCTTACGGCACGATCGAACAGGGCTCGATTAACTCG
TGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTCGCAATTGCAATTTTTGCTGTTCTATCTTTATTAGGTTGGAAGATTT
TTGATTATTTATTAAAAGTCCGTGATCGTAATGCTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCATATCAACAA
GTTTTGCGAGATACATTACAAATTATACCTTTATCGGCAAATCAAGGGGGACAGCTTCATCCAGCATTAGAGCTTGATAA
CCAAGTACTCTATTTTAGTAAGGCTGGTGTTACTGACCCTTTAAAACAAGGTTTATCACCTTTTGAGCGTATTGAATACC
GATATGATCCTGATCAAAAAAAGCTTTATCGTCTTAAATATAGTAATTTAAATACTTCAAACCGAGAGCAACCTTTATCT
AGCACGTTGTTGAGTCAAGTTGAACAGTTTCAAATTATGGTGTTAACACCACAAGAAGTGACAAAGTGGCCAGAAATTAA
TATTGATCCCACAAAGCCAGAAGAGTTTAGAAAACTACCGAAAGGAATAAAAATACAACTCACGGTTGCAGGCGTAAGTT
ATGAGTGGATTTATAGCTTAAACCAAGGGAATTTATCGCTCTCCAAACAAGGAGGGGCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.412	100	0.884