Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   H2784_RS02295 Genome accession   NZ_CP059547
Coordinates   473610..474494 (+) Length   294 a.a.
NCBI ID   WP_024433131.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 10_3     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 468610..479494
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2784_RS02270 (H2784_02270) - 469008..470255 (-) 1248 WP_000893466.1 YihY family inner membrane protein -
  H2784_RS02275 (H2784_02275) wrbA 470543..471136 (+) 594 WP_223069870.1 NAD(P)H:quinone oxidoreductase -
  H2784_RS02280 (H2784_02280) - 471189..471764 (-) 576 WP_000543071.1 xanthine phosphoribosyltransferase -
  H2784_RS02285 (H2784_02285) - 471837..472550 (-) 714 WP_000201544.1 DUF3108 domain-containing protein -
  H2784_RS02290 (H2784_02290) - 472708..473379 (-) 672 WP_001193960.1 hypothetical protein -
  H2784_RS02295 (H2784_02295) tonB2 473610..474494 (+) 885 WP_024433131.1 energy transducer TonB Machinery gene
  H2784_RS02300 (H2784_02300) ybeY 474584..475060 (-) 477 WP_000703571.1 rRNA maturation RNase YbeY -
  H2784_RS02305 (H2784_02305) - 475070..476158 (-) 1089 WP_000122983.1 PhoH family protein -
  H2784_RS02310 (H2784_02310) miaB 476196..477647 (-) 1452 WP_072688873.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33621.54 Da        Isoelectric Point: 9.6000

>NTDB_id=470399 H2784_RS02295 WP_024433131.1 473610..474494(+) (tonB2) [Acinetobacter baumannii strain 10_3]
MLKKRSLSIEPFYYWWQDRVFIAAIILAILLHIFVLLIHFAMPAPSEQSTKEIAISIRPTEDVIKHADFLAQADQQGSGA
FREAHRMSSNSPAPMPSDASTGEAQLETLEKVQQQRKLKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDANMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=470399 H2784_RS02295 WP_024433131.1 473610..474494(+) (tonB2) [Acinetobacter baumannii strain 10_3]
ATGTTGAAAAAAAGAAGTCTATCCATAGAGCCTTTTTATTATTGGTGGCAAGACCGAGTCTTTATCGCTGCAATAATATT
AGCAATCTTACTGCATATTTTTGTGTTGCTCATCCATTTTGCGATGCCTGCGCCGTCAGAACAATCGACTAAAGAAATTG
CAATATCGATTCGTCCTACTGAAGATGTGATCAAGCATGCAGACTTTTTAGCCCAAGCTGATCAACAAGGTTCAGGGGCT
TTTCGGGAAGCTCATCGGATGTCGAGTAACTCTCCAGCGCCTATGCCAAGTGATGCTTCAACAGGAGAAGCTCAGCTAGA
AACTTTAGAAAAAGTGCAGCAACAAAGAAAACTTAAATTTGAAGAAAAAGTACTCATGACTGTATTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGAAAAAAAGCACTTGAACAATTACAAAGTCAGTTTCAGGCAAAAGCTGCCATGGTAGCGAGT
CTTGAAGCTCAGTATTTACAACGTCAGCAAGATTTTAGTCGCCAACAAAAGATAAAAACAGTAGATGGTATTCAAGCCAA
GAAAGATGCGTCGGCAGCTTATCTAGATAAATTTCGTGAAAAAGTAGAGCTTTATGGCAACCGTTATTATCCAGAAGAAG
CGAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGTTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAGCAGCAAAGGCATCGGTACGGCGTGGAGCGCCGTTTGGCCGTTTTGA
TGCAAATATGAAAGATATTTCGGAACTTCGTATTATTCGTACATGGCGTTTTGATCCAGCTGAAGCTGAATTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

99.66

100

0.997