Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | HPSNT_RS07095 | Genome accession | NC_017376 |
| Coordinates | 1473292..1473867 (-) | Length | 191 a.a. |
| NCBI ID | WP_001203607.1 | Uniprot ID | G2MFN4 |
| Organism | Helicobacter pylori SNT49 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1468292..1478867
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPSNT_RS08155 | - | 1469996..1471223 (-) | 1228 | Protein_1369 | restriction endonuclease subunit S | - |
| HPSNT_RS07090 (HPSNT_07290) | - | 1471220..1473259 (-) | 2040 | WP_001147714.1 | class I SAM-dependent DNA methyltransferase | - |
| HPSNT_RS07095 (HPSNT_07295) | comFC | 1473292..1473867 (-) | 576 | WP_001203607.1 | ComF family protein | Machinery gene |
| HPSNT_RS07100 (HPSNT_07300) | tmk | 1473855..1474430 (-) | 576 | WP_000289729.1 | dTMP kinase | - |
| HPSNT_RS07105 (HPSNT_07305) | coaD | 1474432..1474905 (-) | 474 | WP_001169273.1 | pantetheine-phosphate adenylyltransferase | - |
| HPSNT_RS07110 (HPSNT_07310) | - | 1474905..1475468 (-) | 564 | WP_000780110.1 | UbiX family flavin prenyltransferase | - |
| HPSNT_RS07115 (HPSNT_07320) | flgA | 1475478..1476134 (-) | 657 | WP_000697648.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| HPSNT_RS07120 (HPSNT_07325) | uvrD | 1476131..1478176 (-) | 2046 | WP_014536818.1 | DNA helicase UvrD | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21340.89 Da Isoelectric Point: 9.0940
>NTDB_id=47034 HPSNT_RS07095 WP_001203607.1 1473292..1473867(-) (comFC) [Helicobacter pylori SNT49]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGTEFVKIMQEKG
LNAPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRANNAVSYAGKSLEFRANNPRNFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKTHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGTEFVKIMQEKG
LNAPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRANNAVSYAGKSLEFRANNPRNFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKTHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=47034 HPSNT_RS07095 WP_001203607.1 1473292..1473867(-) (comFC) [Helicobacter pylori SNT49]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCACTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCACGGAATTTGTGAAAATCATGCAAGAAAAAGGC
TTGAACGCTCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTAATAATGCTGTTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAACAACCCACGGAATTTCACCTTCAAAGGCGATGAAAACTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGAACCACCTTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAACACACTTTGCGATCGCACTTTG
CAGTGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCACTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCACGGAATTTGTGAAAATCATGCAAGAAAAAGGC
TTGAACGCTCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTAATAATGCTGTTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAACAACCCACGGAATTTCACCTTCAAAGGCGATGAAAACTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGAACCACCTTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAACACACTTTGCGATCGCACTTTG
CAGTGCGGATGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
96.335 |
100 |
0.963 |