Detailed information NTG0470310

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: H2786_RS10290
• Genome accession: NZ_CP059542
• Coordinates: 2164742..2165443 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594585.1
• Uniprot ID: A0A009Q1Y5
• Organism: Acinetobacter baumannii strain E-011922
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2159742..2170443

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H2786_RS10260 (H2786_10265)	-	2160049..2160492 (-)	444	WP_001246675.1	SRPBCC family protein	-
H2786_RS10265 (H2786_10270)	tadA	2160562..2161065 (-)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
H2786_RS10270 (H2786_10275)	-	2161072..2162196 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
H2786_RS10275 (H2786_10280)	ung	2162193..2162906 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
H2786_RS10280 (H2786_10285)	-	2162957..2163553 (-)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
H2786_RS10285 (H2786_10290)	gspK	2163783..2164742 (-)	960	WP_031997570.1	type II secretion system minor pseudopilin GspK	-
H2786_RS10290 (H2786_10295)	xcpW	2164742..2165443 (-)	702	WP_000594585.1	type II secretion system minor pseudopilin GspJ	Machinery gene
H2786_RS10295 (H2786_10300)	xcpV	2165443..2165823 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
H2786_RS10300 (H2786_10305)	-	2165813..2166367 (-)	555	WP_004841361.1	type II secretion system protein	-
H2786_RS10305 (H2786_10310)	-	2166377..2166985 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
H2786_RS10310 (H2786_10315)	-	2167023..2167796 (-)	774	WP_032058876.1	TatD family hydrolase	-
H2786_RS10315 (H2786_10320)	-	2167814..2168155 (-)	342	WP_001183025.1	PilZ domain-containing protein	-
H2786_RS10320 (H2786_10325)	-	2168167..2169147 (-)	981	WP_032058875.1	DNA polymerase III subunit delta'	-
H2786_RS10325 (H2786_10330)	kdsB	2169159..2169920 (-)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26595.57 Da
• Isoelectric Point: 9.5501

>NTDB_id=470310 H2786_RS10290 WP_000594585.1 2164742..2165443(-) (xcpW) [Acinetobacter baumannii strain E-011922]
MIKNKYIHIRSIASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=470310 H2786_RS10290 WP_000594585.1 2164742..2165443(-) (xcpW) [Acinetobacter baumannii strain E-011922]
ATGATAAAAAATAAATATATTCATATCCGAAGCATTGCTTCTCGTCTTGCGGCGCGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009Q1Y5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	100	100	1