Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   H2786_RS02380 Genome accession   NZ_CP059542
Coordinates   485058..485942 (+) Length   294 a.a.
NCBI ID   WP_032059970.1    Uniprot ID   A0A009PAZ5
Organism   Acinetobacter baumannii strain E-011922     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 480058..490942
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2786_RS02355 (H2786_02355) - 480456..481703 (-) 1248 WP_032059968.1 YihY family inner membrane protein -
  H2786_RS02360 (H2786_02360) wrbA 481991..482584 (+) 594 WP_001183355.1 NAD(P)H:quinone oxidoreductase -
  H2786_RS02365 (H2786_02365) - 482637..483212 (-) 576 WP_000543071.1 xanthine phosphoribosyltransferase -
  H2786_RS02370 (H2786_02370) - 483285..483998 (-) 714 WP_000201544.1 DUF3108 domain-containing protein -
  H2786_RS02375 (H2786_02375) - 484156..484827 (-) 672 WP_001193960.1 hypothetical protein -
  H2786_RS02380 (H2786_02380) tonB2 485058..485942 (+) 885 WP_032059970.1 energy transducer TonB Machinery gene
  H2786_RS02385 (H2786_02385) ybeY 486032..486508 (-) 477 WP_000703571.1 rRNA maturation RNase YbeY -
  H2786_RS02390 (H2786_02390) - 486518..487606 (-) 1089 WP_000122983.1 PhoH family protein -
  H2786_RS02395 (H2786_02395) miaB 487644..489095 (-) 1452 WP_031977696.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33678.55 Da        Isoelectric Point: 9.0556

>NTDB_id=470304 H2786_RS02380 WP_032059970.1 485058..485942(+) (tonB2) [Acinetobacter baumannii strain E-011922]
MLKKRSLSIEPFYYWWQDRVFIAAIILAILLHIFVLLIYFAMPAPSEQSTKEIAISIRPTEDVIKHADFLAQADQQGSGA
FREAHRMSSNSPTPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDANMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=470304 H2786_RS02380 WP_032059970.1 485058..485942(+) (tonB2) [Acinetobacter baumannii strain E-011922]
ATGTTGAAAAAAAGAAGTCTATCCATAGAGCCTTTTTATTATTGGTGGCAAGACCGAGTCTTTATCGCTGCAATAATATT
AGCAATCTTACTGCATATTTTTGTGTTGCTCATCTATTTTGCGATGCCTGCGCCGTCAGAACAATCGACTAAAGAAATTG
CAATATCGATTCGTCCTACTGAAGATGTGATCAAGCATGCAGACTTTTTAGCTCAAGCCGATCAACAAGGTTCAGGAGCT
TTTCGGGAAGCTCATCGGATGTCGAGTAACTCTCCAACGCCTATGCCAAGTGATGCTTCAACAGGAGAAGCTCAGCTAGA
AACTTTAGAAAAAGTGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTACTCATGACTGTATTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGAAAAAAAGCACTTGAACAATTACAAAGTCAGTTTCAGGCAAAAGCTGCCATGGTAGCGAGT
CTTGAAGCTCAGTATTTACAACGTCAGCAAGATTTTAGTCGCCAACAAAAGATAAAAACAGTAGATGGTATTCAAGCCAA
GAAAGATGCGTCAGCAGCTTATCTAGATAAATTTCGTGAAAAAGTAGAGCTTTATGGCAACCGTTATTATCCAGAAGAAG
CGAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGTTTG
CTTGAAAGCTCAGGCCATCCAGTTCTAGATGAAGCAGCAAAGGCATCGGTACGGCGTGGAGCGCCGTTTGGCCGTTTTGA
TGCAAATATGAAAGATATTTCGGAACTTCGTATTATTCGTACATGGCGTTTTGATCCAGCTGAAGCTGAATTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A009PAZ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

99.32

100

0.993