Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   H1Q58_RS02355 Genome accession   NZ_CP059540
Coordinates   445776..446726 (+) Length   316 a.a.
NCBI ID   WP_182092592.1    Uniprot ID   A0A7D7MFD4
Organism   Planococcus maritimus strain XJ11     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 440776..451726
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1Q58_RS02340 (H1Q58_02340) - 441876..442589 (+) 714 WP_182092589.1 VOC family protein -
  H1Q58_RS02345 (H1Q58_02345) hflX 442688..443959 (+) 1272 WP_182092590.1 GTPase HflX -
  H1Q58_RS02350 (H1Q58_02350) - 444136..445014 (+) 879 WP_182092591.1 DUF6612 family protein -
  H1Q58_RS02355 (H1Q58_02355) ceuB 445776..446726 (+) 951 WP_182092592.1 ABC transporter permease Machinery gene
  H1Q58_RS02360 (H1Q58_02360) - 446719..447669 (+) 951 WP_182092593.1 iron chelate uptake ABC transporter family permease subunit -
  H1Q58_RS02365 (H1Q58_02365) - 447666..448427 (+) 762 WP_182092594.1 ABC transporter ATP-binding protein -
  H1Q58_RS02370 (H1Q58_02370) - 448557..449198 (+) 642 WP_182092595.1 phosphatase PAP2 family protein -
  H1Q58_RS02375 (H1Q58_02375) - 449556..450839 (-) 1284 WP_182092596.1 ammonium transporter -
  H1Q58_RS02380 (H1Q58_02380) - 450852..451193 (-) 342 WP_182092597.1 P-II family nitrogen regulator -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34922.30 Da        Isoelectric Point: 10.1518

>NTDB_id=470256 H1Q58_RS02355 WP_182092592.1 445776..446726(+) (ceuB) [Planococcus maritimus strain XJ11]
MKKRILLPILILLSLISLFVGVSSISPLDLLDFQSEETQIFLVSRFPRLVAILLAGAGMSMAGLIMQQLSRNKFVSPTTA
GTLDATRLGILVSMLLFANASMIEKMAVAFFFALAGTFLFMQILNRIKFKDAIFIPLIGLMFGNILSSITTFFAYRADVI
QNMSAWLQGDFSMVMKGSYELLYISVPVFIIAYMYANRFTVAGMGEDFSKNLGLKYRSVVNIGLTLVALITATVVLTVGM
IPFLGLIIPNIVSIFKGDHLQKTLPHTAMLGAIFLLVCDILGRVLIYPYEITISLMVGVIGSFIFLIMLFRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=470256 H1Q58_RS02355 WP_182092592.1 445776..446726(+) (ceuB) [Planococcus maritimus strain XJ11]
ATGAAAAAACGTATTTTACTACCCATATTGATCCTTCTATCGCTCATCTCCCTGTTTGTCGGAGTCAGCAGCATCAGTCC
CCTGGATCTTCTGGATTTTCAATCGGAAGAAACGCAGATCTTCCTCGTCAGCCGTTTTCCTCGGTTAGTCGCGATTTTAC
TTGCGGGAGCAGGCATGAGCATGGCAGGGCTCATTATGCAGCAATTGAGCCGCAATAAATTCGTCTCGCCAACAACTGCC
GGCACACTCGATGCGACACGACTCGGGATTCTCGTATCCATGCTGTTATTTGCGAACGCGTCCATGATCGAAAAAATGGC
GGTGGCTTTCTTCTTCGCACTCGCCGGCACGTTCTTGTTCATGCAAATTCTCAACCGCATCAAATTCAAAGATGCCATCT
TTATTCCGCTTATCGGCTTGATGTTCGGCAATATCCTGTCTTCGATCACCACATTTTTCGCCTACCGCGCGGACGTTATC
CAAAACATGTCGGCTTGGCTGCAGGGCGATTTCTCGATGGTCATGAAAGGCAGCTATGAACTTCTTTACATCAGTGTACC
GGTTTTCATCATTGCCTATATGTACGCCAATCGCTTTACAGTGGCGGGGATGGGGGAAGACTTCTCGAAAAACCTGGGAT
TGAAATACCGCAGTGTCGTTAACATCGGCTTGACTTTGGTCGCGCTCATTACGGCGACTGTTGTCTTGACGGTCGGCATG
ATCCCATTTCTTGGCTTGATCATTCCGAATATCGTCTCGATTTTCAAAGGGGACCATCTTCAAAAAACCTTGCCGCATAC
GGCGATGCTCGGGGCTATTTTCTTACTGGTATGTGACATTCTCGGGCGGGTTTTGATTTATCCGTATGAGATCACCATCA
GCCTGATGGTCGGCGTTATCGGAAGCTTTATCTTCCTGATCATGTTGTTTAGGAGGAAAGCTTATGCGTGA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7D7MFD4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.674

99.051

0.532