Detailed information NTG0470246

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: H2N97_RS18795
• Genome accession: NZ_CP059497
• Coordinates: 3778664..3779809 (+)
• Length: 381 a.a.
• NCBI ID: WP_017418708.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JSRB 08
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3773664..3784809

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H2N97_RS18775 (H2N97_18775)	fnr	3774138..3774854 (-)	717	WP_017418713.1	fumarate/nitrate reduction transcriptional regulator Fnr	-
H2N97_RS18780 (H2N97_18780)	narK	3774952..3776142 (-)	1191	WP_017418712.1	nitrate transporter NarK	-
H2N97_RS18785 (H2N97_18785)	argS	3776277..3777947 (-)	1671	WP_025649385.1	arginine--tRNA ligase	-
H2N97_RS18790 (H2N97_18790)	-	3777944..3778372 (-)	429	WP_014419128.1	DUF1934 domain-containing protein	-
H2N97_RS18795 (H2N97_18795)	rapF	3778664..3779809 (+)	1146	WP_017418708.1	tetratricopeptide repeat protein	Regulator
H2N97_RS18800 (H2N97_18800)	-	3779793..3779912 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
H2N97_RS18805 (H2N97_18805)	speB	3780035..3780907 (-)	873	WP_003151054.1	agmatinase	-
H2N97_RS18810 (H2N97_18810)	speE	3780967..3781797 (-)	831	WP_017418706.1	spermidine synthase	-
H2N97_RS18815 (H2N97_18815)	-	3781997..3784069 (+)	2073	WP_017418705.1	transglycosylase domain-containing protein	-
H2N97_RS18820 (H2N97_18820)	-	3784094..3784525 (-)	432	WP_017418704.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45782.29 Da
• Isoelectric Point: 5.0722

>NTDB_id=470246 H2N97_RS18795 WP_017418708.1 3778664..3779809(+) (rapF) [Bacillus velezensis strain JSRB 08]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEEDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=470246 H2N97_RS18795 WP_017418708.1 3778664..3779809(+) (rapF) [Bacillus velezensis strain JSRB 08]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGAAGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAACTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.341	100	0.703
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533