Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   H2N74_RS20070 Genome accession   NZ_CP059495
Coordinates   349553..349717 (+) Length   54 a.a.
NCBI ID   WP_269194677.1    Uniprot ID   -
Organism   Bacillus velezensis strain JSRB 166     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 344553..354717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2N74_RS20065 srfAB 346444..349536 (+) 3093 Protein_313 surfactin non-ribosomal peptide synthetase SrfAB -
  H2N74_RS20070 comS 349553..349717 (+) 165 WP_269194677.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6211.19 Da        Isoelectric Point: 11.7559

>NTDB_id=470173 H2N74_RS20070 WP_269194677.1 349553..349717(+) (comS) [Bacillus velezensis strain JSRB 166]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=470173 H2N74_RS20070 WP_269194677.1 349553..349717(+) (comS) [Bacillus velezensis strain JSRB 166]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGGAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5