Detailed information NTG0047014

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HMPREF0462_RS07440
• Genome accession: NC_017375
• Coordinates: 1532164..1533603 (-)
• Length: 479 a.a.
• NCBI ID: WP_000751651.1
• Uniprot ID: -
• Organism: Helicobacter pylori 83
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1527164..1538603

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HMPREF0462_RS07415 (HMPREF0462_1520)	recG	1528298..1530163 (-)	1866	WP_001158388.1	ATP-dependent DNA helicase RecG	-
HMPREF0462_RS07420 (HMPREF0462_1521)	-	1530245..1530598 (+)	354	WP_000836999.1	hypothetical protein	-
HMPREF0462_RS07425 (HMPREF0462_1522)	-	1530602..1531237 (+)	636	WP_000668030.1	outer membrane protein	-
HMPREF0462_RS07430 (HMPREF0462_1523)	-	1531234..1531986 (-)	753	WP_000767500.1	exodeoxyribonuclease III	-
HMPREF0462_RS07440 (HMPREF0462_1524)	comH	1532164..1533603 (-)	1440	WP_000751651.1	hypothetical protein	Machinery gene
HMPREF0462_RS07445 (HMPREF0462_1526)	dnaA	1533823..1535190 (-)	1368	WP_000380578.1	chromosomal replication initiator protein DnaA	-
HMPREF0462_RS07450 (HMPREF0462_1527)	-	1535342..1535878 (+)	537	WP_000923024.1	purine-nucleoside phosphorylase	-
HMPREF0462_RS07455 (HMPREF0462_1528)	-	1535925..1536164 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HMPREF0462_RS07460 (HMPREF0462_1529)	glmS	1536165..1537958 (+)	1794	WP_000334403.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54852.85 Da
• Isoelectric Point: 7.4581

>NTDB_id=47014 HMPREF0462_RS07440 WP_000751651.1 1532164..1533603(-) (comH) [Helicobacter pylori 83]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTKIVFSSKELKESHPHQMPSLNAPIQKPQNKPTSSQQSLQNFSYTESKLGSKNPKNSLLQPL
ATPNKMSSANEVKAPTNDTKPPLKHSSEDQENNLFVVPPTEKTLPNNTPNANINEHNESNENRDSVEKQAIRDPNVKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTIRQCYLIEEPLKQAWESEYQITTQLVKAVYERPKQDDQTEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=47014 HMPREF0462_RS07440 WP_000751651.1 1532164..1533603(-) (comH) [Helicobacter pylori 83]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACCTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAGGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCTACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCAAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACCCACACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTTCATCGC
AACAATCTCTTCAAAACTTTTCTTACACAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCCTAATAAAATGAGCTCCGCTAATGAAGTTAAAGCGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAATCTCTTTGTAGTGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTAATATTA
ATGAACACAATGAAAGCAATGAGAATAGGGATAGTGTGGAAAAACAAGCGATTAGAGATCCTAATGTTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCTTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACCTTTGAAGCTAAAAACAATTTTACCATTCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCCAGAGCGCGAAAAGACGGCACGATTAGACAATGCTATTTAATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATCAAATCACCACGCAATTAGTGAAAGCTGTATACGAGCGCCCCAAACAAGACGATC
AAACAGAGCCAACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTA
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCCTTGAGTATTGAAAATTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.067	100	0.921