Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   H2R00_RS12685 Genome accession   NZ_CP059494
Coordinates   2565787..2566740 (-) Length   317 a.a.
NCBI ID   WP_154995611.1    Uniprot ID   -
Organism   Bacillus haynesii strain P19     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2560787..2571740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2R00_RS12665 - 2561522..2562943 (+) 1422 WP_154995619.1 MDR family MFS transporter -
  H2R00_RS12670 - 2563133..2564080 (-) 948 WP_154995617.1 siderophore ABC transporter substrate-binding protein -
  H2R00_RS12675 - 2564095..2564853 (-) 759 WP_182071076.1 ABC transporter ATP-binding protein -
  H2R00_RS12680 - 2564853..2565797 (-) 945 WP_154995613.1 iron chelate uptake ABC transporter family permease subunit -
  H2R00_RS12685 ceuB 2565787..2566740 (-) 954 WP_154995611.1 ABC transporter permease Machinery gene
  H2R00_RS12690 - 2567017..2568378 (+) 1362 WP_182069297.1 aspartate kinase -
  H2R00_RS12695 - 2568515..2570233 (+) 1719 WP_154995607.1 methyl-accepting chemotaxis protein -
  H2R00_RS12700 - 2570266..2571693 (-) 1428 WP_182069299.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35121.50 Da        Isoelectric Point: 10.1004

>NTDB_id=470071 H2R00_RS12685 WP_154995611.1 2565787..2566740(-) (ceuB) [Bacillus haynesii strain P19]
MKLRYLLLMLIILSFSSIFIGVKELSPLDLFRLNEDEIQTLYISRIPRLLSIVLAGMSLSICGLIMQQLTRNKFVSPTTA
GTMDWARLGVIIAIVLFSSAGIVVKILFAFVFALFGSFLFVKILDRIKFKDAIFIPLVGMMLGSVVSAISTFMAYQYNII
QNVNAWFEGNFSLVMKGRYELLFLSIPLVIIAYLFANKFTLAGMGESFSINLGLNYKRVVNIGLIIVSIISSVVILTVGT
LPFLGLIIPNIVSIYRGDHLKNSLPHTAILGAVFVLFCDIAGRLVIYPYEISVGLMVGIIGSGVFLYLLLRRKAYAS

Nucleotide


Download         Length: 954 bp        

>NTDB_id=470071 H2R00_RS12685 WP_154995611.1 2565787..2566740(-) (ceuB) [Bacillus haynesii strain P19]
ATGAAACTACGATACTTATTGCTAATGCTCATCATTCTTTCATTCAGCTCGATATTCATCGGCGTTAAGGAGCTTTCGCC
TCTTGATCTTTTCCGCTTGAATGAGGACGAAATTCAAACGCTTTACATAAGCAGAATCCCGCGCTTGCTCAGCATCGTGC
TGGCGGGAATGAGCTTGAGCATCTGCGGGCTGATCATGCAGCAGCTGACGCGCAATAAATTTGTTTCACCGACCACCGCT
GGAACGATGGATTGGGCGAGGCTCGGCGTGATCATTGCGATCGTGCTTTTTTCGTCTGCAGGAATTGTGGTCAAAATACT
GTTTGCCTTTGTTTTTGCACTGTTTGGCAGCTTTTTGTTCGTCAAAATTTTGGACAGAATCAAGTTCAAAGATGCGATTT
TCATCCCTCTCGTCGGTATGATGCTCGGAAGTGTTGTCAGCGCCATTTCTACTTTCATGGCTTATCAGTACAATATTATT
CAAAACGTCAATGCATGGTTTGAAGGGAATTTTTCGCTGGTCATGAAGGGGAGGTATGAGCTCTTATTTCTGAGTATACC
GCTCGTTATCATTGCCTATCTGTTCGCCAATAAATTCACGTTGGCCGGGATGGGGGAGTCTTTTTCCATCAATCTTGGAT
TGAATTATAAGCGGGTGGTCAATATCGGGCTGATCATCGTATCTATTATTTCGTCCGTCGTCATCCTGACGGTCGGCACG
CTTCCCTTTTTGGGATTGATCATCCCGAACATCGTGTCCATCTACAGGGGAGATCATTTGAAAAACAGCCTGCCTCACAC
GGCGATTCTCGGAGCCGTTTTCGTCTTGTTTTGCGATATAGCGGGACGTCTCGTCATTTACCCGTACGAAATTTCGGTTG
GCTTGATGGTCGGCATCATCGGGAGCGGCGTTTTTCTTTACTTGCTTTTAAGGAGAAAAGCCTATGCGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.582

99.685

0.514