Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   H2R00_RS07500 Genome accession   NZ_CP059494
Coordinates   1520152..1520613 (+) Length   153 a.a.
NCBI ID   WP_076794238.1    Uniprot ID   A0AA90IVN0
Organism   Bacillus haynesii strain P19     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1515152..1525613
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2R00_RS07480 fadH 1516178..1516942 (-) 765 WP_154995948.1 2,4-dienoyl-CoA reductase -
  H2R00_RS07485 - 1517088..1517945 (+) 858 WP_182070755.1 metallophosphoesterase -
  H2R00_RS07490 - 1518123..1518620 (+) 498 WP_154995952.1 L,D-transpeptidase family protein -
  H2R00_RS07495 - 1518709..1520010 (+) 1302 WP_154995954.1 MFS transporter -
  H2R00_RS07500 kre 1520152..1520613 (+) 462 WP_076794238.1 YkyB family protein Regulator
  H2R00_RS07505 - 1520643..1521560 (-) 918 WP_154995956.1 chemotaxis protein -
  H2R00_RS07510 - 1521634..1522953 (-) 1320 WP_154995958.1 MFS transporter -
  H2R00_RS07515 - 1523050..1523574 (-) 525 WP_154995960.1 RDD family protein -
  H2R00_RS07520 - 1523746..1523904 (+) 159 WP_176275789.1 hypothetical protein -
  H2R00_RS07525 - 1524096..1525265 (+) 1170 WP_020451186.1 aminotransferase A -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17614.42 Da        Isoelectric Point: 10.6730

>NTDB_id=470052 H2R00_RS07500 WP_076794238.1 1520152..1520613(+) (kre) [Bacillus haynesii strain P19]
MDDHNHTKELKPTVENLSKAIYTVNRHAKTATNPKYLYLLKKKALQKLLNEGKGKKVGLHFSKNPRFSQQQSDVLISLGD
YFFHMPPTKEDFANLPHLGTLNHSYRNPKAHMSLNIAKQLLQNYTGIKEKPLVTNRKRPATKPVFKKLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=470052 H2R00_RS07500 WP_076794238.1 1520152..1520613(+) (kre) [Bacillus haynesii strain P19]
ATGGACGACCATAATCATACGAAAGAATTAAAACCGACAGTTGAAAACCTTTCAAAAGCGATTTATACAGTTAATCGCCA
TGCGAAAACCGCGACTAATCCCAAATACCTGTATCTTCTGAAAAAGAAAGCTTTGCAAAAGCTGCTCAATGAAGGAAAAG
GTAAAAAGGTAGGCCTTCACTTTTCGAAAAATCCAAGATTCAGCCAGCAGCAGTCTGATGTGCTGATTTCTCTCGGAGAC
TACTTTTTTCACATGCCTCCAACAAAAGAAGACTTCGCAAACCTTCCACACTTAGGTACATTAAATCATTCGTATCGGAA
CCCTAAAGCTCATATGTCCTTGAATATAGCGAAACAGCTTCTTCAAAACTACACGGGAATAAAGGAAAAACCGCTCGTCA
CAAACCGGAAGCGCCCAGCCACAAAGCCCGTCTTCAAGAAGCTTGGCGAAAGCTATTTCTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

82.468

100

0.83