Detailed information    

insolico Bioinformatically predicted

Overview


Name   treR   Type   Regulator
Locus tag   H1R75_RS09440 Genome accession   NZ_CP059471
Coordinates   1878631..1879359 (+) Length   242 a.a.
NCBI ID   WP_182001848.1    Uniprot ID   -
Organism   Streptococcus equinus strain MDC1     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1873631..1884359
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1R75_RS09415 (H1R75_09415) rpmF 1874051..1874227 (+) 177 WP_003066947.1 50S ribosomal protein L32 -
  H1R75_RS09420 (H1R75_09420) rpmG 1874244..1874393 (+) 150 WP_002262412.1 50S ribosomal protein L33 -
  H1R75_RS09425 (H1R75_09425) - 1874496..1874822 (+) 327 WP_182001418.1 hypothetical protein -
  H1R75_RS09430 (H1R75_09430) treC 1874796..1876448 (-) 1653 WP_182001419.1 alpha,alpha-phosphotrehalase -
  H1R75_RS09435 (H1R75_09435) treP 1876460..1878436 (-) 1977 WP_182001420.1 PTS system trehalose-specific EIIBC component -
  H1R75_RS09440 (H1R75_09440) treR 1878631..1879359 (+) 729 WP_182001848.1 trehalose operon repressor Regulator
  H1R75_RS09445 (H1R75_09445) - 1879449..1879784 (+) 336 WP_049805806.1 TetR/AcrR family transcriptional regulator C-terminal domain-containing protein -
  H1R75_RS09450 (H1R75_09450) - 1879811..1880272 (-) 462 WP_039696124.1 DUF5085 family protein -
  H1R75_RS09455 (H1R75_09455) - 1880274..1880633 (-) 360 WP_235686238.1 hypothetical protein -
  H1R75_RS09460 (H1R75_09460) - 1880715..1881458 (-) 744 WP_231997664.1 hypothetical protein -
  H1R75_RS09465 (H1R75_09465) - 1881466..1881744 (-) 279 WP_182001421.1 hypothetical protein -
  H1R75_RS09470 (H1R75_09470) - 1881867..1882205 (-) 339 WP_182001422.1 hypothetical protein -
  H1R75_RS09475 (H1R75_09475) - 1882213..1882965 (-) 753 WP_182001423.1 hypothetical protein -
  H1R75_RS09480 (H1R75_09480) - 1882967..1883287 (-) 321 WP_182001849.1 hypothetical protein -
  H1R75_RS09485 (H1R75_09485) - 1883284..1883592 (-) 309 WP_182001424.1 DUF4176 domain-containing protein -
  H1R75_RS09935 - 1883585..1883815 (-) 231 WP_328804801.1 hypothetical protein -

Sequence


Protein


Download         Length: 242 a.a.        Molecular weight: 27831.93 Da        Isoelectric Point: 9.2831

>NTDB_id=469857 H1R75_RS09440 WP_182001848.1 1878631..1879359(+) (treR) [Streptococcus equinus strain MDC1]
MKKYEHIYQILEKDITSGGYSAGDYLPTENELCTQYHVSRDTVRKALSLLAEARLIKKIHGSGSQVIKRETIDFPVSKLT
SYKELVDNFGINSKTNVISIDKLIVDEKLAALTGFSKNSLVWRVIRQRVVDGTASVIDIDYLDKKIVPNMTREIAEKSIY
DYLENQLHLSIAYAQKEITIDQLNDRDKLLLDIGAEHHVVSIKSKVYLANNQQFQFTESRHKLEKFRFVDFATRKNLLPT
KH

Nucleotide


Download         Length: 729 bp        

>NTDB_id=469857 H1R75_RS09440 WP_182001848.1 1878631..1879359(+) (treR) [Streptococcus equinus strain MDC1]
ATGAAGAAATACGAGCACATTTACCAAATTCTAGAAAAAGACATCACATCAGGAGGCTATTCAGCTGGTGATTATCTTCC
TACCGAAAATGAACTCTGTACACAATATCATGTCAGTCGCGACACCGTCCGTAAAGCATTGAGCTTACTTGCCGAAGCAA
GACTAATCAAGAAAATTCACGGCTCTGGTTCACAAGTTATCAAACGCGAAACGATTGACTTTCCTGTTTCAAAATTAACG
AGCTATAAAGAACTTGTCGACAATTTCGGTATTAATTCTAAAACCAACGTCATTTCCATTGATAAGCTAATTGTTGATGA
AAAATTAGCTGCGCTGACAGGATTCTCAAAAAACAGCTTAGTATGGCGCGTGATTCGCCAACGTGTGGTTGATGGCACAG
CCTCTGTCATTGATATTGATTATTTAGATAAAAAAATCGTGCCAAATATGACCCGAGAAATTGCAGAGAAATCTATTTAC
GATTATCTTGAAAATCAACTCCATCTGAGCATCGCTTATGCTCAAAAAGAAATTACCATCGACCAGCTTAACGACCGTGA
CAAACTACTTCTTGATATTGGCGCTGAACATCACGTCGTTTCAATCAAATCAAAAGTCTATCTTGCCAATAATCAACAGT
TTCAGTTCACTGAAAGTAGACACAAACTTGAAAAATTCCGCTTTGTGGATTTTGCAACACGAAAAAACTTGCTACCGACC
AAACACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

69.231

96.694

0.669