Detailed information
Bioinformatically predicted
Overview
| Name | rcrR | Type | Regulator |
| Locus tag | H1R75_RS05915 | Genome accession | NZ_CP059471 |
| Coordinates | 1149483..1149923 (-) | Length | 146 a.a. |
| NCBI ID | WP_004232103.1 | Uniprot ID | A0A1G9MYC1 |
| Organism | Streptococcus equinus strain MDC1 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1124591..1165139 | 1149483..1149923 | within | 0 |
Gene organization within MGE regions
Location: 1124591..1165139
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1R75_RS05790 (H1R75_05790) | - | 1124591..1125085 (-) | 495 | WP_074628605.1 | dihydrofolate reductase | - |
| H1R75_RS05795 (H1R75_05795) | - | 1125169..1126008 (-) | 840 | WP_021142433.1 | thymidylate synthase | - |
| H1R75_RS05800 (H1R75_05800) | - | 1126341..1127519 (+) | 1179 | WP_074483567.1 | hydroxymethylglutaryl-CoA synthase | - |
| H1R75_RS05805 (H1R75_05805) | - | 1127506..1128780 (+) | 1275 | WP_182001169.1 | hydroxymethylglutaryl-CoA reductase, degradative | - |
| H1R75_RS05810 (H1R75_05810) | - | 1129014..1129457 (+) | 444 | WP_094140494.1 | DUF1836 domain-containing protein | - |
| H1R75_RS05815 (H1R75_05815) | trhA | 1129447..1130103 (+) | 657 | WP_024343981.1 | PAQR family membrane homeostasis protein TrhA | - |
| H1R75_RS05820 (H1R75_05820) | fni | 1130128..1131126 (-) | 999 | WP_182001170.1 | type 2 isopentenyl-diphosphate Delta-isomerase | - |
| H1R75_RS05825 (H1R75_05825) | - | 1131123..1132120 (-) | 998 | Protein_1086 | phosphomevalonate kinase | - |
| H1R75_RS05830 (H1R75_05830) | mvaD | 1132107..1133057 (-) | 951 | WP_021142444.1 | diphosphomevalonate decarboxylase | - |
| H1R75_RS05835 (H1R75_05835) | mvk | 1133039..1133917 (-) | 879 | WP_024343978.1 | mevalonate kinase | - |
| H1R75_RS05840 (H1R75_05840) | - | 1134083..1134841 (-) | 759 | WP_020916913.1 | amino acid ABC transporter ATP-binding protein | - |
| H1R75_RS05845 (H1R75_05845) | - | 1134862..1135542 (-) | 681 | WP_182001171.1 | amino acid ABC transporter permease | - |
| H1R75_RS05850 (H1R75_05850) | - | 1135553..1136245 (-) | 693 | WP_074628597.1 | amino acid ABC transporter permease | - |
| H1R75_RS05855 (H1R75_05855) | - | 1136255..1137133 (-) | 879 | WP_182001172.1 | transporter substrate-binding domain-containing protein | - |
| H1R75_RS05860 (H1R75_05860) | - | 1137185..1138216 (-) | 1032 | WP_413251976.1 | uroporphyrinogen decarboxylase family protein | - |
| H1R75_RS05865 (H1R75_05865) | - | 1138802..1139716 (+) | 915 | WP_182001173.1 | LysR family transcriptional regulator | - |
| H1R75_RS05870 (H1R75_05870) | - | 1139778..1140623 (+) | 846 | WP_182001174.1 | aldo/keto reductase | - |
| H1R75_RS05875 (H1R75_05875) | - | 1140659..1141882 (-) | 1224 | WP_024343970.1 | ATP-binding protein | - |
| H1R75_RS05880 (H1R75_05880) | - | 1141890..1142570 (-) | 681 | WP_024343969.1 | response regulator transcription factor | - |
| H1R75_RS05885 (H1R75_05885) | - | 1142586..1143203 (-) | 618 | WP_182001175.1 | GTP pyrophosphokinase family protein | - |
| H1R75_RS05890 (H1R75_05890) | - | 1143293..1143487 (-) | 195 | Protein_1099 | ABC transporter permease | - |
| H1R75_RS05895 (H1R75_05895) | - | 1143487..1143927 (-) | 441 | WP_182001176.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| H1R75_RS05900 (H1R75_05900) | - | 1143930..1145795 (-) | 1866 | WP_182001177.1 | hypothetical protein | - |
| H1R75_RS05905 (H1R75_05905) | rcrQ | 1145903..1147675 (-) | 1773 | WP_182001178.1 | ABC transporter ATP-binding protein | Regulator |
| H1R75_RS05910 (H1R75_05910) | rcrP | 1147665..1149479 (-) | 1815 | WP_182001179.1 | ABC transporter ATP-binding protein | Regulator |
| H1R75_RS05915 (H1R75_05915) | rcrR | 1149483..1149923 (-) | 441 | WP_004232103.1 | MarR family winged helix-turn-helix transcriptional regulator | Regulator |
| H1R75_RS05920 (H1R75_05920) | - | 1150071..1150481 (-) | 411 | WP_074628585.1 | peptide deformylase | - |
| H1R75_RS05925 (H1R75_05925) | - | 1150484..1150987 (-) | 504 | WP_182001180.1 | GNAT family N-acetyltransferase | - |
| H1R75_RS05930 (H1R75_05930) | gdhA | 1151140..1152489 (-) | 1350 | WP_021142476.1 | NADP-specific glutamate dehydrogenase | - |
| H1R75_RS05935 (H1R75_05935) | - | 1152719..1153216 (+) | 498 | WP_027968633.1 | DUF308 domain-containing protein | - |
| H1R75_RS05940 (H1R75_05940) | queF | 1153255..1153746 (-) | 492 | WP_021142478.1 | preQ(1) synthase | - |
| H1R75_RS05945 (H1R75_05945) | queE | 1153761..1154474 (-) | 714 | WP_039690525.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| H1R75_RS05950 (H1R75_05950) | queD | 1154467..1154913 (-) | 447 | WP_027968631.1 | 6-carboxytetrahydropterin synthase QueD | - |
| H1R75_RS05955 (H1R75_05955) | queC | 1154913..1155566 (-) | 654 | WP_004232125.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| H1R75_RS05960 (H1R75_05960) | - | 1155732..1157501 (-) | 1770 | WP_182001181.1 | ABC transporter ATP-binding protein | - |
| H1R75_RS05965 (H1R75_05965) | - | 1157504..1159243 (-) | 1740 | WP_074479620.1 | ABC transporter ATP-binding protein | - |
| H1R75_RS05970 (H1R75_05970) | - | 1159288..1161156 (-) | 1869 | WP_182001182.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| H1R75_RS05975 (H1R75_05975) | - | 1161153..1162358 (-) | 1206 | WP_024343955.1 | CCA tRNA nucleotidyltransferase | - |
| H1R75_RS05980 (H1R75_05980) | dapB | 1162355..1163122 (-) | 768 | WP_004232139.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| H1R75_RS05985 (H1R75_05985) | - | 1163142..1163990 (-) | 849 | WP_027968628.1 | DegV family protein | - |
| H1R75_RS05990 (H1R75_05990) | - | 1163990..1164370 (-) | 381 | WP_021142489.1 | DUF1149 family protein | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 17038.57 Da Isoelectric Point: 8.5024
>NTDB_id=469832 H1R75_RS05915 WP_004232103.1 1149483..1149923(-) (rcrR) [Streptococcus equinus strain MDC1]
MRDKDPFSQLRDFVNLMENRVHELGELHDVENLAGPQGFAVLYLRDNEDKEVFIKDIERKLKISKSVTSNLIKRMEKNGF
IKVVPSEVDKRYKRVVLTELGRAKTKDIDAFHAAVHKQIFDGISREELEISGRVFDRILKNLENKE
MRDKDPFSQLRDFVNLMENRVHELGELHDVENLAGPQGFAVLYLRDNEDKEVFIKDIERKLKISKSVTSNLIKRMEKNGF
IKVVPSEVDKRYKRVVLTELGRAKTKDIDAFHAAVHKQIFDGISREELEISGRVFDRILKNLENKE
Nucleotide
Download Length: 441 bp
>NTDB_id=469832 H1R75_RS05915 WP_004232103.1 1149483..1149923(-) (rcrR) [Streptococcus equinus strain MDC1]
ATGCGAGATAAAGATCCGTTTTCACAATTAAGAGACTTCGTGAATTTGATGGAAAACCGTGTGCACGAACTCGGTGAACT
TCATGATGTGGAGAACTTAGCTGGTCCGCAGGGATTTGCGGTTTTATATTTGAGAGATAATGAAGATAAAGAAGTTTTCA
TTAAAGATATTGAACGTAAGCTTAAAATTTCAAAATCTGTAACCAGTAATTTGATTAAAAGAATGGAAAAGAATGGTTTT
ATAAAAGTTGTTCCATCTGAAGTAGATAAACGTTACAAGCGTGTAGTGCTTACTGAACTTGGTCGAGCTAAGACAAAAGA
TATTGATGCCTTTCACGCTGCGGTTCACAAGCAAATTTTTGATGGCATTAGTCGTGAAGAGCTAGAAATTTCTGGTCGTG
TCTTTGATCGTATTTTGAAAAATTTAGAAAACAAGGAGTAA
ATGCGAGATAAAGATCCGTTTTCACAATTAAGAGACTTCGTGAATTTGATGGAAAACCGTGTGCACGAACTCGGTGAACT
TCATGATGTGGAGAACTTAGCTGGTCCGCAGGGATTTGCGGTTTTATATTTGAGAGATAATGAAGATAAAGAAGTTTTCA
TTAAAGATATTGAACGTAAGCTTAAAATTTCAAAATCTGTAACCAGTAATTTGATTAAAAGAATGGAAAAGAATGGTTTT
ATAAAAGTTGTTCCATCTGAAGTAGATAAACGTTACAAGCGTGTAGTGCTTACTGAACTTGGTCGAGCTAAGACAAAAGA
TATTGATGCCTTTCACGCTGCGGTTCACAAGCAAATTTTTGATGGCATTAGTCGTGAAGAGCTAGAAATTTCTGGTCGTG
TCTTTGATCGTATTTTGAAAAATTTAGAAAACAAGGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrR | Streptococcus mutans UA159 |
52.448 |
97.945 |
0.514 |