Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   H1R75_RS02385 Genome accession   NZ_CP059471
Coordinates   428171..428896 (+) Length   241 a.a.
NCBI ID   WP_027968144.1    Uniprot ID   -
Organism   Streptococcus equinus strain MDC1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 423171..433896
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1R75_RS02355 (H1R75_02355) - 423591..425012 (+) 1422 WP_027968148.1 NCS2 family permease -
  H1R75_RS02360 (H1R75_02360) tsaE 425179..425622 (+) 444 WP_024344600.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  H1R75_RS02365 (H1R75_02365) - 425615..426127 (+) 513 WP_182001585.1 GNAT family N-acetyltransferase -
  H1R75_RS02370 (H1R75_02370) brpA 426138..427304 (+) 1167 WP_027968145.1 biofilm formation/cell division transcriptional regulator BrpA -
  H1R75_RS02375 (H1R75_02375) - 427377..427691 (-) 315 WP_021141714.1 hypothetical protein -
  H1R75_RS02380 (H1R75_02380) - 427688..428107 (-) 420 WP_021141715.1 HIT family protein -
  H1R75_RS02385 (H1R75_02385) pptA 428171..428896 (+) 726 WP_027968144.1 ABC transporter ATP-binding protein Regulator
  H1R75_RS02390 (H1R75_02390) - 428899..429933 (+) 1035 WP_182001586.1 ABC transporter permease -
  H1R75_RS02395 (H1R75_02395) ccrZ 429967..430800 (+) 834 WP_045798213.1 cell cycle regulator CcrZ -
  H1R75_RS02400 (H1R75_02400) trmB 430800..431438 (+) 639 WP_021141720.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  H1R75_RS02410 (H1R75_02410) - 431749..432708 (+) 960 WP_235686241.1 sensor domain-containing diguanylate cyclase -
  H1R75_RS02415 (H1R75_02415) - 432714..433781 (+) 1068 WP_182001588.1 bifunctional glycosyltransferase family 2/GtrA family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26674.99 Da        Isoelectric Point: 4.6769

>NTDB_id=469812 H1R75_RS02385 WP_027968144.1 428171..428896(+) (pptA) [Streptococcus equinus strain MDC1]
MLKIENLTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGLLTPYQGQITLDGLTLANNQADYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLEFEAAMARAKELLKLFRLSDKLDWFPINFSKGMKQKVMIICAFMVNPSLFIVDEPF
LGLDPLAISDLTDLLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHHGQVRAVGNLAELREAFGQEDASLNDIYIALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=469812 H1R75_RS02385 WP_027968144.1 428171..428896(+) (pptA) [Streptococcus equinus strain MDC1]
ATGTTAAAAATTGAAAATCTTACAGGTGGATATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
TGAGCTTGTTGGATTAATTGGCTTAAATGGTGCTGGAAAATCAACAACCATAAATGAAATTATTGGACTTTTGACGCCTT
ATCAAGGTCAAATTACGCTAGATGGTTTGACTTTGGCTAATAATCAAGCTGATTATCGTAAAAAAATTGGATTTATTCCT
GAAACGCCAAGTTTATATGAAGAATTGACTTTGCGTGAGCATTTGGAAACTGTTGCTATGGCTTATGATCTTGAGTTTGA
GGCTGCTATGGCGCGTGCAAAAGAGTTGCTAAAACTTTTCCGTCTGTCTGATAAACTTGATTGGTTCCCGATTAATTTTT
CAAAAGGGATGAAGCAAAAGGTCATGATTATTTGTGCTTTCATGGTTAATCCAAGTCTGTTTATTGTCGATGAGCCGTTT
TTAGGATTGGATCCGTTGGCTATTTCTGATTTGACAGATTTGCTTGCGCAAGAAAAAGCAAAAGGTAAGGCTATCTTGAT
GTCAACGCACGTGCTAGATGCTGCTGAAAAAATGTGTGACCGTTTTGTGATTTTGCATCATGGTCAGGTAAGAGCTGTAG
GAAATTTGGCTGAACTGCGAGAAGCTTTCGGTCAGGAAGATGCCAGCTTGAATGACATTTACATAGCTTTGACTAAAGAG
GGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

79.079

99.17

0.784
  pptA Streptococcus thermophilus LMD-9

77.824

99.17

0.772