Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   pbN1_RS12595 Genome accession   NZ_CP059467
Coordinates   2666432..2666818 (-) Length   128 a.a.
NCBI ID   WP_169118297.1    Uniprot ID   -
Organism   Aromatoleum bremense strain PbN1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2661432..2671818
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  pbN1_RS12580 (pbN1_25630) - 2663329..2665470 (-) 2142 WP_169203095.1 methyl-accepting chemotaxis protein -
  pbN1_RS12585 (pbN1_25640) - 2665522..2666037 (-) 516 WP_169203096.1 chemotaxis protein CheW -
  pbN1_RS12590 (pbN1_25650) - 2666043..2666408 (-) 366 WP_011236795.1 response regulator -
  pbN1_RS12595 (pbN1_25660) pilG 2666432..2666818 (-) 387 WP_169118297.1 response regulator Regulator
  pbN1_RS12600 (pbN1_25670) - 2666889..2667068 (-) 180 WP_169203097.1 rubredoxin -
  pbN1_RS12605 (pbN1_25680) - 2667177..2668046 (+) 870 WP_169203098.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  pbN1_RS12610 (pbN1_25690) thiE 2668039..2668665 (+) 627 WP_169203099.1 thiamine phosphate synthase -
  pbN1_RS12615 (pbN1_25700) hemL 2668714..2669997 (+) 1284 WP_169203100.1 glutamate-1-semialdehyde 2,1-aminomutase -
  pbN1_RS12620 (pbN1_25710) mgtE 2670126..2671568 (-) 1443 WP_169203101.1 magnesium transporter -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14106.28 Da        Isoelectric Point: 7.3233

>NTDB_id=469765 pbN1_RS12595 WP_169118297.1 2666432..2666818(-) (pilG) [Aromatoleum bremense strain PbN1]
MDLTGLRVMVIDDSNTIRRSAEIFLTHSGCEVLLAEDGFDALAKIADHRPHVIFVDIMMPRLDGYQTCALIKKNPRLSAT
PVIMLSSKDGLFDRARGRMAGSDEYLTKPFTKDSLLRAAAAHASRATD

Nucleotide


Download         Length: 387 bp        

>NTDB_id=469765 pbN1_RS12595 WP_169118297.1 2666432..2666818(-) (pilG) [Aromatoleum bremense strain PbN1]
ATGGATCTGACCGGACTCAGGGTGATGGTGATCGACGACAGCAATACCATCCGGCGCAGCGCCGAGATCTTTCTGACCCA
CTCGGGCTGCGAGGTGCTCCTCGCCGAGGACGGCTTCGATGCGCTGGCGAAAATCGCCGACCATCGCCCCCATGTCATTT
TCGTCGACATCATGATGCCGCGGCTCGACGGCTACCAGACCTGCGCGCTGATCAAGAAGAACCCCCGGCTTTCAGCAACG
CCGGTGATCATGCTGTCGTCGAAGGACGGGCTGTTCGACCGCGCCCGCGGCCGCATGGCCGGGTCGGACGAATATCTCAC
CAAGCCGTTCACGAAGGACAGCCTGCTCAGGGCGGCAGCTGCCCACGCCAGCCGCGCCACAGACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-118)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

66.393

95.313

0.633