Detailed information NTG0469752

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: pbN1_RS05710
• Genome accession: NZ_CP059467
• Coordinates: 1200575..1201723 (-)
• Length: 382 a.a.
• NCBI ID: WP_169201184.1
• Uniprot ID: -
• Organism: Aromatoleum bremense strain PbN1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1195575..1206723

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
pbN1_RS05685 (pbN1_11530)	-	1195592..1196443 (-)	852	WP_244857173.1	LysR substrate-binding domain-containing protein	-
pbN1_RS05690 (pbN1_11540)	-	1196542..1197738 (+)	1197	WP_169201087.1	YbfB/YjiJ family MFS transporter	-
pbN1_RS05695 (pbN1_11550)	-	1197810..1198940 (-)	1131	WP_169201086.1	radical SAM protein	-
pbN1_RS05700 (pbN1_11560)	ftsX	1199017..1199919 (-)	903	WP_169201085.1	permease-like cell division protein FtsX	-
pbN1_RS05705 (pbN1_11570)	-	1199916..1200578 (-)	663	WP_169201084.1	ATP-binding cassette domain-containing protein	-
pbN1_RS05710 (pbN1_11580)	pilA	1200575..1201723 (-)	1149	WP_169201184.1	signal recognition particle-docking protein FtsY	Machinery gene
pbN1_RS05715 (pbN1_11590)	-	1201864..1203237 (+)	1374	WP_169201083.1	pitrilysin family protein	-
pbN1_RS05720 (pbN1_11600)	-	1203239..1204624 (+)	1386	WP_169201082.1	pitrilysin family protein	-
pbN1_RS05725 (pbN1_11610)	rsmD	1204621..1205160 (+)	540	WP_169201081.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
pbN1_RS05730 (pbN1_11620)	coaD	1205157..1205648 (+)	492	WP_169117677.1	pantetheine-phosphate adenylyltransferase	-
pbN1_RS05735 (pbN1_11630)	-	1205663..1205917 (+)	255	WP_041645708.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 40656.62 Da
• Isoelectric Point: 6.3734

>NTDB_id=469752 pbN1_RS05710 WP_169201184.1 1200575..1201723(-) (pilA) [Aromatoleum bremense strain PbN1]
MFGFLKKKPAKPNAVEDKAQPGEIPAAEPALDQAEPIAEAVRPAPPAEAGPDFEAPFEAPLPLAAEIARPAAKRSWSERL
KAGLSRTRQQLGGGLASLFGRRKIDEELLEELEATLLMADCGVEATQHLLGELRKRWKRDRLETADQLQKALADELHAIL
LPLEEPLDVSGHSPYIIMIAGVNGSGKTTSIGKLAKYFQAQGRSVLLAAGDTFRAAAREQLMTWGQRNNVTVIAQDGGDS
AAVIFDAINAAKARRIDVVLADTAGRLPTQLHLMDEIAKVKRVIAKASPTGPHEVLLVLDANIGQNALAQVKAFDSAIGV
TGLVVTKLDGTAKGGVVAAIARQYPRPLRFIGVGEGIDDLQPFKAREFVDALFDTNGAGSAA

Nucleotide

• Length: 1149 bp

>NTDB_id=469752 pbN1_RS05710 WP_169201184.1 1200575..1201723(-) (pilA) [Aromatoleum bremense strain PbN1]
ATGTTTGGTTTCCTGAAAAAAAAGCCCGCGAAGCCCAACGCGGTGGAAGACAAGGCGCAGCCGGGCGAGATCCCGGCCGC
GGAGCCCGCGCTCGATCAGGCCGAACCGATCGCCGAAGCGGTGCGGCCGGCGCCACCGGCCGAAGCCGGTCCCGACTTTG
AAGCTCCCTTTGAAGCCCCCCTCCCGCTCGCCGCGGAGATTGCCAGGCCGGCCGCGAAACGTTCGTGGTCCGAGCGGCTC
AAGGCGGGACTCAGCCGTACCCGCCAGCAGCTCGGCGGGGGGCTCGCGAGCCTCTTCGGCCGGCGCAAGATTGACGAGGA
GCTGCTCGAGGAGCTCGAGGCGACGCTGCTGATGGCCGACTGCGGCGTCGAGGCGACGCAGCACCTGCTCGGCGAACTGC
GCAAGCGCTGGAAGCGCGACCGGCTCGAGACTGCCGACCAGCTGCAGAAGGCGCTCGCCGACGAGTTGCACGCGATCCTG
CTGCCGCTCGAGGAACCGCTCGACGTGTCCGGCCACAGTCCCTACATCATCATGATCGCCGGCGTGAACGGCTCGGGCAA
GACGACCTCGATCGGCAAGCTCGCGAAATATTTCCAGGCGCAGGGCAGGAGCGTGCTGCTCGCTGCCGGCGACACGTTTC
GCGCCGCGGCGCGCGAACAGCTGATGACGTGGGGTCAGCGCAACAACGTCACCGTCATCGCGCAGGACGGCGGCGACTCG
GCGGCGGTGATCTTCGACGCGATCAACGCGGCCAAGGCACGCCGCATCGATGTCGTGCTCGCCGACACCGCGGGGCGGCT
GCCGACGCAGCTGCATCTGATGGACGAGATCGCGAAAGTCAAACGGGTCATCGCGAAGGCTTCCCCGACCGGGCCGCACG
AAGTGCTGCTCGTTCTCGACGCCAACATCGGCCAGAACGCGCTGGCGCAGGTGAAGGCTTTCGACAGCGCGATCGGCGTC
ACCGGCCTCGTCGTCACGAAGCTCGACGGCACCGCGAAAGGCGGAGTCGTCGCCGCGATCGCACGGCAGTACCCGCGGCC
GCTGCGCTTCATCGGCGTCGGCGAAGGGATCGACGACCTGCAGCCGTTCAAGGCGCGCGAGTTCGTCGACGCGCTGTTCG
ATACGAACGGAGCCGGCAGCGCGGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (91-156)

• SRP54-type protein, GTPase domain (SRP54) (175-373)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	63.696	79.319	0.505