Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | H1W83_RS23740 | Genome accession | NZ_CP059457 |
| Coordinates | 4534204..4535256 (-) | Length | 350 a.a. |
| NCBI ID | WP_013085018.1 | Uniprot ID | D5DMH8 |
| Organism | Priestia megaterium strain 2020WEIHUA_L | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 4529204..4540256
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1W83_RS23700 (H1W83_23545) | - | 4530220..4531044 (+) | 825 | WP_016765555.1 | YqhG family protein | - |
| H1W83_RS23705 (H1W83_23550) | - | 4531068..4531253 (-) | 186 | WP_013059170.1 | YqzE family protein | - |
| H1W83_RS23710 (H1W83_23555) | comGG | 4531297..4531671 (-) | 375 | WP_016765556.1 | competence type IV pilus minor pilin ComGG | - |
| H1W83_RS23715 (H1W83_23560) | comGF | 4531661..4532098 (-) | 438 | WP_016765557.1 | competence type IV pilus minor pilin ComGF | - |
| H1W83_RS23720 (H1W83_23565) | - | 4532095..4532433 (-) | 339 | WP_016765558.1 | type II secretion system protein | - |
| H1W83_RS23725 (H1W83_23570) | comGD | 4532417..4532854 (-) | 438 | WP_016765559.1 | competence type IV pilus minor pilin ComGD | - |
| H1W83_RS23730 (H1W83_23575) | comGC | 4532841..4533152 (-) | 312 | WP_016765560.1 | competence type IV pilus major pilin ComGC | - |
| H1W83_RS23735 (H1W83_23580) | comGB | 4533167..4534213 (-) | 1047 | WP_016765561.1 | competence type IV pilus assembly protein ComGB | - |
| H1W83_RS23740 (H1W83_23585) | comGA | 4534204..4535256 (-) | 1053 | WP_013085018.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| H1W83_RS23745 (H1W83_23590) | - | 4535524..4535907 (-) | 384 | WP_013059178.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| H1W83_RS23750 (H1W83_23595) | - | 4536170..4536406 (+) | 237 | WP_013059179.1 | DUF2626 domain-containing protein | - |
| H1W83_RS23755 (H1W83_23600) | - | 4536444..4537076 (-) | 633 | WP_034648929.1 | MBL fold metallo-hydrolase | - |
| H1W83_RS23760 (H1W83_23605) | - | 4537285..4537461 (+) | 177 | WP_013059181.1 | DUF2759 domain-containing protein | - |
| H1W83_RS23765 (H1W83_23610) | - | 4537497..4538399 (-) | 903 | WP_237892956.1 | M14 family metallocarboxypeptidase | - |
| H1W83_RS23770 (H1W83_23615) | - | 4538511..4539479 (-) | 969 | WP_016765565.1 | ROK family glucokinase | - |
| H1W83_RS23775 (H1W83_23620) | - | 4539482..4539688 (-) | 207 | WP_013059184.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39671.03 Da Isoelectric Point: 9.1859
>NTDB_id=469728 H1W83_RS23740 WP_013085018.1 4534204..4535256(-) (comGA) [Priestia megaterium strain 2020WEIHUA_L]
MTEIEQFATYVIRDAYECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
MTEIEQFATYVIRDAYECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
Nucleotide
Download Length: 1053 bp
>NTDB_id=469728 H1W83_RS23740 WP_013085018.1 4534204..4535256(-) (comGA) [Priestia megaterium strain 2020WEIHUA_L]
TTGACCGAAATTGAACAGTTTGCTACTTACGTTATACGAGATGCATATGAGTGCCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAAGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGCAATGTTATTACATTAGAAGATCCTATTGAAAAACCGAGCGAAACAGTCCTTCAAGTACA
GGTAAATGAACGGGCAGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAATTTGGCGTTAGCTTTCAAGAAATGGAACAGACCCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCCGCTTGTAAAAAAATGAGAA
AACATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCAGTAATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
TTGACCGAAATTGAACAGTTTGCTACTTACGTTATACGAGATGCATATGAGTGCCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAAGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGCAATGTTATTACATTAGAAGATCCTATTGAAAAACCGAGCGAAACAGTCCTTCAAGTACA
GGTAAATGAACGGGCAGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAATTTGGCGTTAGCTTTCAAGAAATGGAACAGACCCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCCGCTTGTAAAAAAATGAGAA
AACATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCAGTAATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
58.857 |
100 |
0.589 |