Detailed information NTG0046969

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPIN_RS07165
• Genome accession: NC_017372
• Coordinates: 1498748..1500187 (+)
• Length: 479 a.a.
• NCBI ID: WP_000751681.1
• Uniprot ID: E8QE26
• Organism: Helicobacter pylori India7
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1493748..1505187

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPIN_RS07140 (HPIN_07460)	glmS	1494397..1496190 (-)	1794	WP_000334433.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
HPIN_RS07145 (HPIN_07465)	-	1496191..1496430 (-)	240	WP_000461841.1	DUF2443 family protein	-
HPIN_RS07150 (HPIN_07470)	-	1496466..1497008 (-)	543	WP_000922962.1	hypothetical protein	-
HPIN_RS07155 (HPIN_07475)	dnaA	1497160..1498527 (+)	1368	WP_000380566.1	chromosomal replication initiator protein DnaA	-
HPIN_RS07165 (HPIN_07480)	comH	1498748..1500187 (+)	1440	WP_000751681.1	hypothetical protein	Machinery gene
HPIN_RS07175 (HPIN_07485)	-	1500367..1501119 (+)	753	WP_000780315.1	exodeoxyribonuclease III	-
HPIN_RS07180 (HPIN_07490)	-	1501116..1501751 (-)	636	WP_000668054.1	outer membrane protein	-
HPIN_RS07185 (HPIN_07495)	-	1501755..1502102 (-)	348	WP_000837031.1	hypothetical protein	-
HPIN_RS07190 (HPIN_07500)	recG	1502184..1504049 (+)	1866	WP_001158417.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54964.01 Da
• Isoelectric Point: 7.0809

>NTDB_id=46969 HPIN_RS07165 WP_000751681.1 1498748..1500187(+) (comH) [Helicobacter pylori India7]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHMSTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNALMQKPQNKPHSSQQPPQNFSYPEPKLGSKNSKNSLLQPL
ITPSKTSPTNEVKTPTNDTKPPLKHSSEDQENNLFIAPPTEKTLPNNTPNTDISENNESNENKDSVEKQAIRDPNVKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSHAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFALFQAR
SSTEKCKRARARKDGTIRQCYLIEEPLKQAWESEYQITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=46969 HPIN_RS07165 WP_000751681.1 1498748..1500187(+) (comH) [Helicobacter pylori India7]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTAACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCATATGTCCACTGCAATTGTCTATCAACCTCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAGATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCATCCGCACCAAATGCCTTCTTTAAACGCGCTCATGCAAAAACCACAAAACAAGCCCCATTCATCGC
AACAACCTCCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
ATAACTCCTAGCAAAACAAGCCCCACTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAGCACCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACACTGATATTA
GTGAAAACAATGAAAGCAATGAGAATAAAGATAGTGTGGAAAAACAAGCCATTAGAGATCCTAATGTTAAAGAATTTGCG
TGCGGAAAGTGGGTTTATGACGATGAAAATTTACAAGCCTACCGCCCGAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGATTACAGCCACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTCGCGCTTTTTCAAGCCAGA
AGTTCTACAGAAAAATGCAAAAGGGCCAGAGCGCGAAAAGACGGCACAATTAGGCAATGCTATCTCATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGTGAGTATCAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAGAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGTTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTGA

Domains

No domain identified.

3D structure

• AlphaFold DB: E8QE26

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	94.781	100	0.948