Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   H1D58_RS09990 Genome accession   NZ_CP059419
Coordinates   1826402..1827028 (+) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain ENCL48880     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1821402..1832028
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1D58_RS09970 (H1D58_09970) - 1821801..1823561 (-) 1761 WP_163347219.1 Lon protease family protein -
  H1D58_RS09975 (H1D58_09975) matP 1823748..1824200 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  H1D58_RS09980 (H1D58_09980) ompA 1824266..1825318 (-) 1053 WP_017694761.1 porin OmpA -
  H1D58_RS09985 (H1D58_09985) sulA 1825675..1826184 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  H1D58_RS09990 (H1D58_09990) sxy/tfoX 1826402..1827028 (+) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  H1D58_RS09995 (H1D58_09995) yccS 1826985..1829147 (-) 2163 WP_046618420.1 YccS family putative transporter -
  H1D58_RS10000 (H1D58_10000) - 1829166..1829612 (-) 447 WP_022647660.1 YccF domain-containing protein -
  H1D58_RS10005 (H1D58_10005) helD 1829735..1831789 (+) 2055 WP_163347220.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=469514 H1D58_RS09990 WP_023315767.1 1826402..1827028(+) (sxy/tfoX) [Enterobacter hormaechei strain ENCL48880]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=469514 H1D58_RS09990 WP_023315767.1 1826402..1827028(+) (sxy/tfoX) [Enterobacter hormaechei strain ENCL48880]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGTGAAATTCATCATCGCGCACT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTATTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCTTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACTAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572