Detailed information NTG0469469

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: H1Q60_RS17645
• Genome accession: NZ_CP059405
• Coordinates: 3441446..3442582 (-)
• Length: 378 a.a.
• NCBI ID: WP_101293899.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain MV2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3436446..3447582

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1Q60_RS17605 (H1Q60_17605)	-	3436985..3437203 (+)	219	WP_014417667.1	helix-turn-helix transcriptional regulator	-
H1Q60_RS17610 (H1Q60_17610)	-	3437251..3437532 (+)	282	WP_101293896.1	hypothetical protein	-
H1Q60_RS17615 (H1Q60_17615)	-	3437584..3437829 (-)	246	WP_041481754.1	helix-turn-helix domain-containing protein	-
H1Q60_RS17620 (H1Q60_17620)	-	3438327..3439043 (+)	717	WP_224960726.1	hypothetical protein	-
H1Q60_RS17625 (H1Q60_17625)	-	3439080..3439388 (-)	309	WP_224960729.1	hypothetical protein	-
H1Q60_RS17630 (H1Q60_17630)	-	3439401..3440825 (-)	1425	WP_101293999.1	lipase	-
H1Q60_RS17635 (H1Q60_17635)	-	3440875..3441240 (+)	366	WP_014417672.1	DUF1433 domain-containing protein	-
H1Q60_RS17640 (H1Q60_17640)	-	3441283..3441456 (-)	174	WP_169061491.1	hypothetical protein	-
H1Q60_RS17645 (H1Q60_17645)	rapC	3441446..3442582 (-)	1137	WP_101293899.1	RapH N-terminal domain-containing protein	Regulator
H1Q60_RS17650 (H1Q60_17650)	-	3442764..3443594 (-)	831	WP_014417674.1	SHOCT domain-containing protein	-
H1Q60_RS17655 (H1Q60_17655)	-	3443761..3444564 (-)	804	WP_224960735.1	SH3 domain-containing protein	-
H1Q60_RS17660 (H1Q60_17660)	-	3444652..3447291 (-)	2640	WP_101293901.1	phage tail protein	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 44640.00 Da
• Isoelectric Point: 4.9328

>NTDB_id=469469 H1Q60_RS17645 WP_101293899.1 3441446..3442582(-) (rapC) [Bacillus velezensis strain MV2]
MKQLISSSKVGVKINEWYKYIRMFSVPDAEVLKSEVEQEINAMEENQDLLLYYSLMCFRHQLMLDYLEPKTMNEERPEIS
DLLEKIESSQAKLKGILEYYFNFFRGMYEFEEYEYLKAISFYKQAEKKLSLVADEIERAEFHYKVAEIYYHMKQTHMSMH
HIVQAIESYRAHETYSVREIQCSFVIGLNYLDMEYPEKAIPHFQKAYKKALEIDMPRLAGSALYNLGISSFSEEKFDEAI
EYFKEGALIYEQNGYEHANRLLDILFMLAKTNFKVNKKTDGTAVYKHGLSLAKNLNDEVLTKMFDFLNALYIDDNKETLN
EILAYLEFKTMFSDVEDLATDAAKYYTKNEDHKAAGLFYEKVLYAQKQIQRGDCLYEI

Nucleotide

• Length: 1137 bp

>NTDB_id=469469 H1Q60_RS17645 WP_101293899.1 3441446..3442582(-) (rapC) [Bacillus velezensis strain MV2]
TTGAAACAGTTAATCTCCTCATCAAAAGTCGGCGTGAAGATTAATGAGTGGTACAAGTATATTCGTATGTTTAGTGTTCC
TGATGCAGAGGTGCTGAAATCAGAAGTTGAACAAGAAATAAATGCTATGGAAGAAAATCAGGATTTATTGTTGTACTATT
CCCTCATGTGTTTTAGGCATCAATTAATGCTTGATTATCTTGAGCCAAAAACGATGAATGAAGAACGTCCTGAAATTTCA
GACTTATTAGAAAAGATCGAAAGCAGCCAAGCTAAATTGAAAGGAATTCTTGAATATTACTTTAACTTTTTCCGTGGAAT
GTATGAATTTGAAGAATACGAATATCTTAAAGCGATAAGTTTTTACAAACAAGCGGAAAAGAAGCTGTCACTTGTAGCCG
ATGAAATTGAGCGAGCGGAGTTTCATTACAAAGTTGCTGAAATTTATTATCACATGAAACAAACACACATGTCGATGCAC
CATATTGTTCAAGCAATTGAAAGCTACAGAGCGCATGAAACCTATTCTGTTAGAGAAATTCAATGTTCTTTTGTTATTGG
TCTAAATTATTTAGATATGGAGTACCCAGAAAAGGCTATCCCTCATTTTCAAAAAGCTTATAAAAAAGCACTTGAAATTG
ATATGCCTAGATTAGCTGGATCCGCTCTATATAATTTAGGGATCTCCTCTTTTTCTGAAGAAAAGTTCGATGAGGCTATT
GAGTATTTCAAAGAAGGAGCGTTGATCTATGAGCAGAACGGATATGAACATGCTAACCGCTTATTAGACATTCTTTTCAT
GTTAGCGAAAACGAACTTTAAGGTAAATAAGAAAACTGACGGAACAGCTGTTTATAAACATGGACTGTCTTTGGCTAAAA
ACTTAAATGATGAAGTATTAACCAAAATGTTTGATTTCCTGAATGCCCTTTACATTGACGATAACAAAGAAACACTAAAT
GAGATTCTTGCTTATTTAGAATTTAAAACAATGTTTTCCGATGTGGAGGACTTAGCAACCGACGCAGCGAAGTATTATAC
AAAAAATGAAGACCATAAAGCGGCTGGATTATTTTATGAGAAAGTGCTTTATGCCCAAAAACAAATTCAGAGAGGGGATT
GTCTTTATGAAATTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_8) (222-249)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	48.148	100	0.481
rapF	Bacillus subtilis subsp. subtilis str. 168	45.144	100	0.455