Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | H1Q60_RS10195 | Genome accession | NZ_CP059405 |
| Coordinates | 1967503..1969938 (+) | Length | 811 a.a. |
| NCBI ID | WP_017419467.1 | Uniprot ID | A0A411A1F9 |
| Organism | Bacillus velezensis strain MV2 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1962503..1974938
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1Q60_RS10180 (H1Q60_10180) | ctsR | 1965380..1965844 (+) | 465 | WP_003156396.1 | transcriptional regulator CtsR | - |
| H1Q60_RS10185 (H1Q60_10185) | - | 1965858..1966415 (+) | 558 | WP_017419465.1 | UvrB/UvrC motif-containing protein | - |
| H1Q60_RS10190 (H1Q60_10190) | - | 1966415..1967506 (+) | 1092 | WP_003156398.1 | protein arginine kinase | - |
| H1Q60_RS10195 (H1Q60_10195) | clpC | 1967503..1969938 (+) | 2436 | WP_017419467.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| H1Q60_RS10200 (H1Q60_10200) | radA | 1970032..1971411 (+) | 1380 | WP_017419468.1 | DNA repair protein RadA | Machinery gene |
| H1Q60_RS10205 (H1Q60_10205) | disA | 1971415..1972497 (+) | 1083 | WP_003156401.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| H1Q60_RS10210 (H1Q60_10210) | - | 1972611..1973711 (+) | 1101 | WP_003156403.1 | PIN/TRAM domain-containing protein | - |
| H1Q60_RS10215 (H1Q60_10215) | ispD | 1973724..1974422 (+) | 699 | WP_025650291.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| H1Q60_RS10220 (H1Q60_10220) | ispF | 1974415..1974891 (+) | 477 | WP_003156407.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90134.55 Da Isoelectric Point: 5.8528
>NTDB_id=469441 H1Q60_RS10195 WP_017419467.1 1967503..1969938(+) (clpC) [Bacillus velezensis strain MV2]
MMFGRFTERAQKVLALAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQKEVESLIGRGQESATSVPH
YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSASGTNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKTWKEKQGQENSEVSVEDIAMV
VSSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
TDIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDG
EFVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQKEVESLIGRGQESATSVPH
YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSASGTNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKTWKEKQGQENSEVSVEDIAMV
VSSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
TDIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDG
EFVVKTTAKTN
Nucleotide
Download Length: 2436 bp
>NTDB_id=469441 H1Q60_RS10195 WP_017419467.1 1967503..1969938(+) (clpC) [Bacillus velezensis strain MV2]
ATGATGTTTGGAAGGTTTACAGAGCGAGCTCAAAAGGTATTGGCACTGGCACAGGAAGAAGCACTGCGCTTAGGCCATAC
AAATATCGGAACTGAACATATACTATTAGGGTTAGTCCGTGAAGGTGAAGGGATCGCATTTAAAGCTTTAGAAGCTCTTG
GCCTTAATTCAGATAAAATGCAGAAAGAAGTGGAAAGTTTGATCGGTCGAGGGCAGGAAAGTGCCACCTCTGTTCCTCAT
TACACACCTCGAGCCAAAAAGGTAATAGAGCTATCAATGGATGAAGCCAGAAAGCTAGGACATTCTTATGTGGGAACAGA
ACACATACTTCTCGGATTGATTCGTGAAGGAGAAGGCGTGGCGGCGAGAGTTCTGAATAATCTCGGTGTCAGCTTGAATA
AAGCGAGACAGCAAGTGCTGCAGCTTCTGGGAAGCAATGAGACGGGATCTTCTGCATCCGGTACCAACAGCAATGCAAAC
ACGCCGACGCTTGACAGTCTGGCGCGTGATTTAACTGCGATTGCGAAGGAAGACAGTCTTGATCCGGTTATCGGGCGAAG
CAAAGAAATTCAGCGTGTTATTGAGGTATTAAGCCGCAGAACGAAAAATAATCCCGTTCTTATCGGAGAACCGGGTGTAG
GTAAAACTGCGATTGCTGAAGGCCTTGCACAGCAGATCATCAATAATGAAGTGCCGGAAATATTACGTGATAAACGCGTA
ATGACGTTAGACATGGGTACGGTTGTAGCCGGTACGAAATACCGCGGAGAATTTGAAGACCGCTTGAAAAAAGTAATGGA
TGAAATACGTCAGGCCGGCAATATTATTTTATTCATTGACGAACTGCATACACTGATCGGAGCGGGGGGAGCAGAAGGTG
CGATTGATGCATCGAATATCTTAAAACCTTCACTGGCCCGCGGAGAGCTTCAATGCATCGGTGCCACAACGCTTGATGAA
TACCGTAAATATATCGAAAAAGACGCGGCTCTCGAGCGCCGTTTCCAGCCGATTCAGGTGGATCAGCCGTCAGCCGATGA
AAGCATTCAAATTTTAAAAGGGCTCCGTGACCGCTATGAAGCGCATCACCGCGTATCCATTACCGATGAAGCGATCGAAG
CCGCGGTTAAATTGTCCGACCGTTATATTTCTGACCGCTTCCTTCCGGATAAAGCGATCGATTTAATTGATGAAGCCGGT
TCAAAAGTGCGTCTCCGTTCTTTCACAACGCCTCCGAACTTAAAAGAGCTTGAGCAGAAACTCGATGAAGTTCGCAAGGA
AAAAGACGCTGCCGTTCAGAGCCAGGAGTTTGAAAAAGCGGCTTCCCTTCGTGATACGGAGCAGCGCCTGAGAGAACAGG
TGGAAGACACGAAAAAAACCTGGAAAGAAAAACAAGGCCAGGAGAACTCCGAAGTTTCTGTAGAGGATATCGCGATGGTT
GTATCCAGCTGGACCGGGGTGCCCGTATCTAAAATTGCCCAAACGGAAACAGATAAGCTTCTCAATATGGAAAGCATTCT
GCATTCCCGCGTCATCGGCCAGGATGAAGCCGTTGTAGCCGTGGCAAAGGCTGTCAGACGTGCAAGAGCCGGACTGAAGG
ACCCGAAACGTCCGATTGGTTCATTCATCTTCTTAGGCCCTACAGGCGTTGGGAAGACAGAGCTGGCAAGAGCGCTGGCG
GAATCCATTTTCGGTGATGAGGAAGCGATGATCAGAGTGGATATGTCCGAATACATGGAGAAACACTCGACTTCACGTCT
TGTCGGTTCTCCTCCGGGATATGTTGGCTATGATGAAGGCGGCCAGCTGACAGAAAAAGTGAGAAGAAAACCTTACTCTG
TCGTATTGCTTGATGAAATTGAAAAAGCGCACCCTGATGTGTTTAACATTCTCCTGCAAGTGCTTGAAGACGGACGCTTA
ACTGATTCAAAAGGACGCACTGTGGATTTCCGCAACACGATCCTGATTATGACGTCAAACGTCGGAGCGAGCGAGCTGAA
ACGCAACAAATATGTGGGCTTCAATGTGCAGGATGAATCACAAAACCATAAAGACATGAAAGACAAAGTCATGGGAGAGC
TGAAGCGTGCCTTCAGACCTGAGTTTATCAACCGGATTGACGAAATTATCGTCTTCCACTCCCTTGAGAAAAAACATCTT
ACAGACATCGTGTCGCTTATGTCTGATCAGTTAACAAAACGTCTGAAAGAACAAGATCTCTCTATCGAGCTGACGGATGC
TGCAAAAGCAAAAGTAGCAGAAGAGGGCGTCGATTTGGAATACGGCGCACGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TGGAGGACCGGTTATCAGAAGAACTCCTCAGAGGCAATATTGATAAAGGGCAGCACATTGTTCTTGATGTTGAGGACGGC
GAATTTGTCGTAAAAACAACTGCTAAAACGAACTAA
ATGATGTTTGGAAGGTTTACAGAGCGAGCTCAAAAGGTATTGGCACTGGCACAGGAAGAAGCACTGCGCTTAGGCCATAC
AAATATCGGAACTGAACATATACTATTAGGGTTAGTCCGTGAAGGTGAAGGGATCGCATTTAAAGCTTTAGAAGCTCTTG
GCCTTAATTCAGATAAAATGCAGAAAGAAGTGGAAAGTTTGATCGGTCGAGGGCAGGAAAGTGCCACCTCTGTTCCTCAT
TACACACCTCGAGCCAAAAAGGTAATAGAGCTATCAATGGATGAAGCCAGAAAGCTAGGACATTCTTATGTGGGAACAGA
ACACATACTTCTCGGATTGATTCGTGAAGGAGAAGGCGTGGCGGCGAGAGTTCTGAATAATCTCGGTGTCAGCTTGAATA
AAGCGAGACAGCAAGTGCTGCAGCTTCTGGGAAGCAATGAGACGGGATCTTCTGCATCCGGTACCAACAGCAATGCAAAC
ACGCCGACGCTTGACAGTCTGGCGCGTGATTTAACTGCGATTGCGAAGGAAGACAGTCTTGATCCGGTTATCGGGCGAAG
CAAAGAAATTCAGCGTGTTATTGAGGTATTAAGCCGCAGAACGAAAAATAATCCCGTTCTTATCGGAGAACCGGGTGTAG
GTAAAACTGCGATTGCTGAAGGCCTTGCACAGCAGATCATCAATAATGAAGTGCCGGAAATATTACGTGATAAACGCGTA
ATGACGTTAGACATGGGTACGGTTGTAGCCGGTACGAAATACCGCGGAGAATTTGAAGACCGCTTGAAAAAAGTAATGGA
TGAAATACGTCAGGCCGGCAATATTATTTTATTCATTGACGAACTGCATACACTGATCGGAGCGGGGGGAGCAGAAGGTG
CGATTGATGCATCGAATATCTTAAAACCTTCACTGGCCCGCGGAGAGCTTCAATGCATCGGTGCCACAACGCTTGATGAA
TACCGTAAATATATCGAAAAAGACGCGGCTCTCGAGCGCCGTTTCCAGCCGATTCAGGTGGATCAGCCGTCAGCCGATGA
AAGCATTCAAATTTTAAAAGGGCTCCGTGACCGCTATGAAGCGCATCACCGCGTATCCATTACCGATGAAGCGATCGAAG
CCGCGGTTAAATTGTCCGACCGTTATATTTCTGACCGCTTCCTTCCGGATAAAGCGATCGATTTAATTGATGAAGCCGGT
TCAAAAGTGCGTCTCCGTTCTTTCACAACGCCTCCGAACTTAAAAGAGCTTGAGCAGAAACTCGATGAAGTTCGCAAGGA
AAAAGACGCTGCCGTTCAGAGCCAGGAGTTTGAAAAAGCGGCTTCCCTTCGTGATACGGAGCAGCGCCTGAGAGAACAGG
TGGAAGACACGAAAAAAACCTGGAAAGAAAAACAAGGCCAGGAGAACTCCGAAGTTTCTGTAGAGGATATCGCGATGGTT
GTATCCAGCTGGACCGGGGTGCCCGTATCTAAAATTGCCCAAACGGAAACAGATAAGCTTCTCAATATGGAAAGCATTCT
GCATTCCCGCGTCATCGGCCAGGATGAAGCCGTTGTAGCCGTGGCAAAGGCTGTCAGACGTGCAAGAGCCGGACTGAAGG
ACCCGAAACGTCCGATTGGTTCATTCATCTTCTTAGGCCCTACAGGCGTTGGGAAGACAGAGCTGGCAAGAGCGCTGGCG
GAATCCATTTTCGGTGATGAGGAAGCGATGATCAGAGTGGATATGTCCGAATACATGGAGAAACACTCGACTTCACGTCT
TGTCGGTTCTCCTCCGGGATATGTTGGCTATGATGAAGGCGGCCAGCTGACAGAAAAAGTGAGAAGAAAACCTTACTCTG
TCGTATTGCTTGATGAAATTGAAAAAGCGCACCCTGATGTGTTTAACATTCTCCTGCAAGTGCTTGAAGACGGACGCTTA
ACTGATTCAAAAGGACGCACTGTGGATTTCCGCAACACGATCCTGATTATGACGTCAAACGTCGGAGCGAGCGAGCTGAA
ACGCAACAAATATGTGGGCTTCAATGTGCAGGATGAATCACAAAACCATAAAGACATGAAAGACAAAGTCATGGGAGAGC
TGAAGCGTGCCTTCAGACCTGAGTTTATCAACCGGATTGACGAAATTATCGTCTTCCACTCCCTTGAGAAAAAACATCTT
ACAGACATCGTGTCGCTTATGTCTGATCAGTTAACAAAACGTCTGAAAGAACAAGATCTCTCTATCGAGCTGACGGATGC
TGCAAAAGCAAAAGTAGCAGAAGAGGGCGTCGATTTGGAATACGGCGCACGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TGGAGGACCGGTTATCAGAAGAACTCCTCAGAGGCAATATTGATAAAGGGCAGCACATTGTTCTTGATGTTGAGGACGGC
GAATTTGTCGTAAAAACAACTGCTAAAACGAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.917 |
100 |
0.969 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.688 |
98.767 |
0.491 |
| clpC | Streptococcus thermophilus LMD-9 |
46.359 |
100 |
0.471 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.117 |
100 |
0.469 |
| clpC | Streptococcus pneumoniae Rx1 |
45.141 |
100 |
0.453 |
| clpC | Streptococcus pneumoniae D39 |
45.141 |
100 |
0.453 |
| clpC | Streptococcus mutans UA159 |
44.203 |
100 |
0.451 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.772 |
100 |
0.449 |
| clpE | Streptococcus mutans UA159 |
53.313 |
80.025 |
0.427 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.709 |
84.834 |
0.422 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.388 |
80.025 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.388 |
80.025 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.388 |
80.025 |
0.419 |
| clpE | Streptococcus pneumoniae R6 |
52.388 |
80.025 |
0.419 |