Detailed information NTG0469434

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: H1Q60_RS07610
• Genome accession: NZ_CP059405
• Coordinates: 1473622..1474767 (+)
• Length: 381 a.a.
• NCBI ID: WP_081364451.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain MV2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1468622..1479767

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1Q60_RS07590 (H1Q60_07590)	fnr	1469096..1469812 (-)	717	WP_017418713.1	fumarate/nitrate reduction transcriptional regulator Fnr	-
H1Q60_RS07595 (H1Q60_07595)	narK	1469910..1471100 (-)	1191	WP_181816593.1	nitrate transporter NarK	-
H1Q60_RS07600 (H1Q60_07600)	argS	1471235..1472905 (-)	1671	WP_181816594.1	arginine--tRNA ligase	-
H1Q60_RS07605 (H1Q60_07605)	-	1472902..1473330 (-)	429	WP_003151069.1	DUF1934 family protein	-
H1Q60_RS07610 (H1Q60_07610)	rapF	1473622..1474767 (+)	1146	WP_081364451.1	Rap family tetratricopeptide repeat protein	Regulator
H1Q60_RS07615 (H1Q60_07615)	-	1474751..1474870 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
H1Q60_RS07620 (H1Q60_07620)	speB	1474993..1475865 (-)	873	WP_003151054.1	agmatinase	-
H1Q60_RS07625 (H1Q60_07625)	speE	1475924..1476754 (-)	831	WP_003151052.1	spermidine synthase	-
H1Q60_RS07630 (H1Q60_07630)	-	1476954..1479026 (+)	2073	WP_106067806.1	transglycosylase domain-containing protein	-
H1Q60_RS07635 (H1Q60_07635)	-	1479051..1479482 (-)	432	WP_017418704.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45782.29 Da
• Isoelectric Point: 5.0694

>NTDB_id=469434 H1Q60_RS07610 WP_081364451.1 1473622..1474767(+) (rapF) [Bacillus velezensis strain MV2]
MASVLSSSAIGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=469434 H1Q60_RS07610 WP_081364451.1 1473622..1474767(+) (rapF) [Bacillus velezensis strain MV2]
GTGGCGAGTGTTTTATCGTCTTCAGCGATTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGATTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGCCTGGAAGATGACCAGGATCTTCACCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAACTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.341	100	0.703
rapC	Bacillus subtilis subsp. subtilis str. 168	53.158	99.738	0.53