Detailed information NTG0469271

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: H0S62_RS15250
• Genome accession: NZ_CP059386
• Coordinates: 3064848..3065549 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594581.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain 36-1512
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3059848..3070549

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0S62_RS15215 (H0S62_15210)	kdsB	3060371..3061132 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
H0S62_RS15220 (H0S62_15215)	-	3061144..3062124 (+)	981	WP_001075412.1	DNA polymerase III subunit delta'	-
H0S62_RS15225 (H0S62_15220)	-	3062136..3062477 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
H0S62_RS15230 (H0S62_15225)	-	3062495..3063268 (+)	774	WP_000497302.1	TatD family hydrolase	-
H0S62_RS15235 (H0S62_15230)	-	3063306..3063914 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
H0S62_RS15240 (H0S62_15235)	-	3063924..3064478 (+)	555	WP_002057406.1	type II secretion system protein	-
H0S62_RS15245 (H0S62_15240)	xcpV	3064468..3064848 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
H0S62_RS15250 (H0S62_15245)	xcpW	3064848..3065549 (+)	702	WP_000594581.1	type II secretion system minor pseudopilin GspJ	Machinery gene
H0S62_RS15255 (H0S62_15250)	gspK	3065549..3066508 (+)	960	WP_005139244.1	type II secretion system minor pseudopilin GspK	-
H0S62_RS15260 (H0S62_15255)	-	3066738..3067334 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
H0S62_RS15265 (H0S62_15260)	ung	3067385..3068098 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
H0S62_RS15270 (H0S62_15265)	-	3068095..3069219 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
H0S62_RS15275 (H0S62_15270)	tadA	3069226..3069729 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
H0S62_RS15280 (H0S62_15275)	-	3069824..3070129 (+)	306	WP_000122230.1	IS630 transposase-related protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26731.68 Da
• Isoelectric Point: 9.3468

>NTDB_id=469271 H0S62_RS15250 WP_000594581.1 3064848..3065549(+) (xcpW) [Acinetobacter baumannii strain 36-1512]
MIKNKYIHIRSFSSRLAERSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=469271 H0S62_RS15250 WP_000594581.1 3064848..3065549(+) (xcpW) [Acinetobacter baumannii strain 36-1512]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGTCTTGCAGAACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAAATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983