Detailed information NTG0046924

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPF16_RS07295
• Genome accession: NC_017368
• Coordinates: 1493526..1494965 (-)
• Length: 479 a.a.
• NCBI ID: WP_000751690.1
• Uniprot ID: -
• Organism: Helicobacter pylori F16
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1488526..1499965

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPF16_RS07270 (HPF16_1418)	recG	1489660..1491525 (-)	1866	WP_001158359.1	ATP-dependent DNA helicase RecG	-
HPF16_RS07275 (HPF16_1419)	-	1491607..1491960 (+)	354	WP_000837070.1	hypothetical protein	-
HPF16_RS07280 (HPF16_1420)	-	1491964..1492599 (+)	636	WP_000668030.1	outer membrane protein	-
HPF16_RS07285 (HPF16_1421)	-	1492596..1493348 (-)	753	WP_000767572.1	exodeoxyribonuclease III	-
HPF16_RS07295 (HPF16_1422)	comH	1493526..1494965 (-)	1440	WP_000751690.1	hypothetical protein	Machinery gene
HPF16_RS07300 (HPF16_1423)	dnaA	1495186..1496553 (-)	1368	WP_000380579.1	chromosomal replication initiator protein DnaA	-
HPF16_RS07305 (HPF16_1424)	-	1496705..1497247 (+)	543	WP_000922938.1	hypothetical protein	-
HPF16_RS07310 (HPF16_1425)	-	1497283..1497522 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HPF16_RS07315 (HPF16_1426)	glmS	1497523..1499316 (+)	1794	WP_000334378.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
HPF16_RS07320 (HPF16_1427)	thyX	1499339..1499965 (+)	627	WP_000451932.1	FAD-dependent thymidylate synthase	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54998.00 Da
• Isoelectric Point: 7.2472

>NTDB_id=46924 HPF16_RS07295 WP_000751690.1 1493526..1494965(-) (comH) [Helicobacter pylori F16]
MKKTLFLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQILGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEPHPHQMPSLNAPIQKPQNKPNSSQQSIQNFPYTESKLGSKNPKNSLLQPL
ATPNKISSTNEVKTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNNTPNANINEHNESNENRDSVEKQAIRDPNVKEFA
CGKWVYDDENLQAYRPSILKRIDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESQYQITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITHNEL
DLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCIVLEIEEQPRAKSTPLSIENSKVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=46924 HPF16_RS07295 WP_000751690.1 1493526..1494965(-) (comH) [Helicobacter pylori F16]
ATGAAAAAAACCCTTTTTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCTCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAAGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAATTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAATACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCCACATCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCAATTCATCGC
AACAATCTATTCAAAACTTTCCTTACACAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCCTAATAAAATAAGCTCCACTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACTCCTAACGCTAATATTA
ATGAACACAATGAAAGCAATGAGAATAGGGATAGTGTGGAAAAACAAGCGATTAGAGATCCTAATGTTAAAGAATTTGCG
TGCGGAAAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCATTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCACGAAAAGACGGCACGACTAGACAGTGCTATCTGATAGAAGAGCCTTT
AAAACAAGCATGGGAAAGTCAGTATCAAATCACCACGCAATTAGTAAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AGATAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTG
GATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATAGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCCTTGAGTATTGAAAACTCTAAAGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.067	100	0.921