Detailed information NTG0046905

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPF57_RS07410
• Genome accession: NC_017367
• Coordinates: 1526235..1527674 (-)
• Length: 479 a.a.
• NCBI ID: WP_000751648.1
• Uniprot ID: -
• Organism: Helicobacter pylori F57
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1521235..1532674

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPF57_RS07385 (HPF57_1436)	recG	1522369..1524234 (-)	1866	WP_001158396.1	ATP-dependent DNA helicase RecG	-
HPF57_RS07390 (HPF57_1437)	-	1524316..1524669 (+)	354	WP_000836997.1	hypothetical protein	-
HPF57_RS07395 (HPF57_1438)	-	1524673..1525308 (+)	636	WP_000668030.1	outer membrane protein	-
HPF57_RS07400 (HPF57_1439)	-	1525305..1526057 (-)	753	WP_000767568.1	exodeoxyribonuclease III	-
HPF57_RS07410 (HPF57_1440)	comH	1526235..1527674 (-)	1440	WP_000751648.1	hypothetical protein	Machinery gene
HPF57_RS07420 (HPF57_1441)	dnaA	1527896..1529263 (-)	1368	WP_000380583.1	chromosomal replication initiator protein DnaA	-
HPF57_RS07425 (HPF57_1442)	-	1529415..1529957 (+)	543	WP_000922952.1	purine-nucleoside phosphorylase	-
HPF57_RS07430 (HPF57_1443)	-	1529993..1530232 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HPF57_RS07435 (HPF57_1444)	glmS	1530233..1532026 (+)	1794	WP_000334372.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54944.82 Da
• Isoelectric Point: 7.0431

>NTDB_id=46905 HPF57_RS07410 WP_000751648.1 1526235..1527674(-) (comH) [Helicobacter pylori F57]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KFSLETTLNPNRPTIPRNTQIVFSSKELKEPHSHQMPSLNAPIQKPQNKPTSSQQSLQNFPYTESKLGSKNPKNSLLQPL
ATPNKMSSANEVKTPTNDTKPPLKHSSEDQENNLFIAPPTEKTLPNNTPNANINEHNESNENRDNVEKQAIRDPNVKEFA
CGKWVYDDENLQAYRPSILKRIDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKATYERPKQDDQTEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=46905 HPF57_RS07410 WP_000751648.1 1526235..1527674(-) (comH) [Helicobacter pylori F57]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCTCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAATTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCCGCACTCGCACCAAATGCCTTCTTTAAACGCACCCATACAAAAACCACAAAACAAACCCACTTCATCGC
AACAATCTCTTCAAAACTTTCCTTACACAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCCTAATAAAATGAGTTCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAATCTCTTTATAGCACCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTAATATTA
ATGAACACAATGAAAGCAATGAGAATAGGGATAATGTGGAAAAACAAGCCATTAGAGATCCTAATGTTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCATTGATGAAGACAAGCA
GACTGCGACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATTCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCCAGAGCGCGAAAAGACGGCACGACTAGACAATGCTATCTCATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCACTTATGAGCGCCCCAAACAAGACGATC
AAACAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CTAAAAGCACGCCTTTGAGTATTGAAAATTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.276	100	0.923