Detailed information NTG0468905

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: HU024_RS18455
• Genome accession: NZ_CP059344
• Coordinates: 3754828..3755973 (-)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain K01
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3749828..3760973

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HU024_RS18430 (HU024_18430)	-	3750111..3750544 (+)	434	Protein_3603	hypothetical protein	-
HU024_RS18435 (HU024_18435)	-	3750569..3752641 (-)	2073	WP_032875881.1	transglycosylase domain-containing protein	-
HU024_RS18440 (HU024_18440)	speE	3752841..3753671 (+)	831	WP_003151052.1	spermidine synthase	-
HU024_RS18445 (HU024_18445)	speB	3753730..3754602 (+)	873	WP_032875884.1	agmatinase	-
HU024_RS18450 (HU024_18450)	-	3754725..3754844 (-)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
HU024_RS18455 (HU024_18455)	rapF	3754828..3755973 (-)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
HU024_RS18460 (HU024_18460)	-	3756204..3757559 (+)	1356	WP_032875887.1	YncE family protein	-
HU024_RS18465 (HU024_18465)	-	3757599..3758975 (+)	1377	WP_032875890.1	YncE family protein	-
HU024_RS18470 (HU024_18470)	-	3758982..3759494 (-)	513	Protein_3611	bacteriocin biosynthesis protein AlbG	-
HU024_RS18475 (HU024_18475)	-	3759648..3760076 (+)	429	WP_032869448.1	DUF1934 domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=468905 HU024_RS18455 WP_074534220.1 3754828..3755973(-) (rapF) [Bacillus velezensis strain K01]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=468905 HU024_RS18455 WP_074534220.1 3754828..3755973(-) (rapF) [Bacillus velezensis strain K01]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541