Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   HZT45_RS19215 Genome accession   NZ_CP059318
Coordinates   352399..352563 (+) Length   54 a.a.
NCBI ID   WP_012116773.1    Uniprot ID   -
Organism   Bacillus velezensis strain BIOMA BV10     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 347399..357563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZT45_RS19210 srfAB 349344..352334 (+) 2991 Protein_316 surfactin non-ribosomal peptide synthetase SrfAB -
  HZT45_RS19215 comS 352399..352563 (+) 165 WP_012116773.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6153.16 Da        Isoelectric Point: 12.0559

>NTDB_id=468562 HZT45_RS19215 WP_012116773.1 352399..352563(+) (comS) [Bacillus velezensis strain BIOMA BV10]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=468562 HZT45_RS19215 WP_012116773.1 352399..352563(+) (comS) [Bacillus velezensis strain BIOMA BV10]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

61.364

81.481

0.5