Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   HZT45_RS06985 Genome accession   NZ_CP059318
Coordinates   1353879..1354343 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain BIOMA BV10     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1348879..1359343
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZT45_RS06965 (HZT45_06965) - 1349359..1351179 (+) 1821 WP_052827371.1 PAS domain-containing protein -
  HZT45_RS06970 (HZT45_06970) - 1351160..1352373 (-) 1214 Protein_1330 aminotransferase A -
  HZT45_RS06975 (HZT45_06975) - 1352574..1352735 (-) 162 WP_007409608.1 hypothetical protein -
  HZT45_RS06980 (HZT45_06980) cheV 1352924..1353835 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  HZT45_RS06985 (HZT45_06985) kre 1353879..1354343 (-) 465 WP_003154622.1 YkyB family protein Regulator
  HZT45_RS06990 (HZT45_06990) - 1354466..1355758 (-) 1293 WP_015239757.1 MFS transporter -
  HZT45_RS06995 (HZT45_06995) - 1355834..1356328 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  HZT45_RS07000 (HZT45_07000) - 1356403..1357266 (-) 864 WP_052827372.1 metallophosphoesterase -
  HZT45_RS07005 (HZT45_07005) fadH 1357411..1358175 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  HZT45_RS07010 (HZT45_07010) - 1358340..1358791 (+) 452 Protein_1338 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=468515 HZT45_RS06985 WP_003154622.1 1353879..1354343(-) (kre) [Bacillus velezensis strain BIOMA BV10]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=468515 HZT45_RS06985 WP_003154622.1 1353879..1354343(-) (kre) [Bacillus velezensis strain BIOMA BV10]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929