Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   HZT45_RS04210 Genome accession   NZ_CP059318
Coordinates   842901..843692 (+) Length   263 a.a.
NCBI ID   WP_052827193.1    Uniprot ID   -
Organism   Bacillus velezensis strain BIOMA BV10     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 837901..848692
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZT45_RS04185 (HZT45_04185) - 839896..840780 (+) 885 WP_015239425.1 PhzF family phenazine biosynthesis isomerase -
  HZT45_RS04190 (HZT45_04190) - 840857..841441 (+) 585 WP_007408549.1 nitroreductase -
  HZT45_RS04195 (HZT45_04195) - 841480..841671 (-) 192 WP_003155508.1 YfhD family protein -
  HZT45_RS04200 (HZT45_04200) - 841742..841852 (-) 111 WP_003155504.1 YfhE family protein -
  HZT45_RS04205 (HZT45_04205) - 841910..842809 (-) 900 WP_181467522.1 TIGR01777 family oxidoreductase -
  HZT45_RS04210 (HZT45_04210) recX 842901..843692 (+) 792 WP_052827193.1 recombination regulator RecX Regulator
  HZT45_RS04215 (HZT45_04215) - 843699..844013 (+) 315 WP_007408553.1 YfhH family protein -
  HZT45_RS04220 (HZT45_04220) - 844157..845350 (+) 1194 WP_025284446.1 MFS transporter -
  HZT45_RS04225 (HZT45_04225) - 845390..845779 (-) 390 WP_043020687.1 DUF2606 family protein -
  HZT45_RS04230 (HZT45_04230) - 845742..846653 (-) 912 WP_015239429.1 serine protease -
  HZT45_RS04235 (HZT45_04235) - 846800..846952 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  HZT45_RS04240 (HZT45_04240) - 847076..847345 (+) 270 WP_012117118.1 YfhJ family protein -
  HZT45_RS04245 (HZT45_04245) - 847478..848005 (+) 528 WP_015417063.1 SH3 domain-containing protein -
  HZT45_RS04250 (HZT45_04250) - 848091..848426 (+) 336 WP_043020688.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 31003.23 Da        Isoelectric Point: 6.3788

>NTDB_id=468499 HZT45_RS04210 WP_052827193.1 842901..843692(+) (recX) [Bacillus velezensis strain BIOMA BV10]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQYGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDNEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=468499 HZT45_RS04210 WP_052827193.1 842901..843692(+) (recX) [Bacillus velezensis strain BIOMA BV10]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGGTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTCGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGTACGGCGATGATGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACACCGGACATGGTCATTTCTGAGGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAAATACAAGAA
GCGCTGAAACATATCGGCAAAATCCTGAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATAATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGTTATGACGGCAGTTATGAAAGCGGAATGAAG
GTTAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.468

100

0.795