Detailed information NTG0468495

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: HZT45_RS01945
• Genome accession: NZ_CP059318
• Coordinates: 396118..397266 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain BIOMA BV10
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 391118..402266

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HZT45_RS01925 (HZT45_01925)	-	391515..392198 (-)	684	WP_012116795.1	ABC transporter ATP-binding protein	-
HZT45_RS01930 (HZT45_01930)	-	392213..393649 (-)	1437	WP_052827042.1	ABC transporter permease	-
HZT45_RS01935 (HZT45_01935)	-	393862..394545 (+)	684	WP_007410267.1	response regulator transcription factor	-
HZT45_RS01940 (HZT45_01940)	-	394532..395965 (+)	1434	WP_162492834.1	HAMP domain-containing sensor histidine kinase	-
HZT45_RS01945 (HZT45_01945)	rapC	396118..397266 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
HZT45_RS01950 (HZT45_01950)	phrC	397250..397369 (+)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
HZT45_RS01955 (HZT45_01955)	-	397518..397628 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
HZT45_RS01960 (HZT45_01960)	-	397708..399072 (-)	1365	WP_052827044.1	aspartate kinase	-
HZT45_RS01965 (HZT45_01965)	ceuB	399486..400439 (+)	954	WP_012116802.1	ABC transporter permease	Machinery gene
HZT45_RS01970 (HZT45_01970)	-	400429..401376 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
HZT45_RS01975 (HZT45_01975)	-	401370..402128 (+)	759	WP_043021401.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=468495 HZT45_RS01945 WP_007410270.1 396118..397266(+) (rapC) [Bacillus velezensis strain BIOMA BV10]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=468495 HZT45_RS01945 WP_007410270.1 396118..397266(+) (rapC) [Bacillus velezensis strain BIOMA BV10]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTTTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTATTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568