Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   H0529_RS15410 Genome accession   NZ_CP059300
Coordinates   3172824..3173978 (+) Length   384 a.a.
NCBI ID   WP_058207667.1    Uniprot ID   A0A505ZVD9
Organism   Acinetobacter baumannii strain AC1633     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3167824..3178978
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H0529_RS15385 (H0529_15380) - 3168012..3169226 (+) 1215 WP_001177956.1 oxygenase MpaB family protein -
  H0529_RS15390 (H0529_15385) - 3169296..3169502 (-) 207 WP_000182542.1 hypothetical protein -
  H0529_RS15395 (H0529_15390) - 3169552..3171633 (-) 2082 WP_001120682.1 TonB-dependent copper receptor -
  H0529_RS15400 (H0529_15395) - 3171706..3172134 (-) 429 WP_000231981.1 DUF2946 family protein -
  H0529_RS15405 (H0529_15400) def 3172171..3172701 (-) 531 WP_001196539.1 peptide deformylase -
  H0529_RS15410 (H0529_15405) tsaP 3172824..3173978 (+) 1155 WP_058207667.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  H0529_RS15415 (H0529_15410) dprA 3173999..3175129 (+) 1131 WP_031967017.1 DNA-processing protein DprA Machinery gene
  H0529_RS15420 (H0529_15415) - 3175180..3175749 (+) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  H0529_RS15425 (H0529_15420) - 3176141..3177061 (-) 921 WP_000084546.1 DMT family transporter -
  H0529_RS15430 (H0529_15425) - 3177167..3177817 (-) 651 WP_087937506.1 TetR/AcrR family transcriptional regulator -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42382.32 Da        Isoelectric Point: 8.5909

>NTDB_id=468416 H0529_RS15410 WP_058207667.1 3172824..3173978(+) (tsaP) [Acinetobacter baumannii strain AC1633]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCFGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
NSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAFVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=468416 H0529_RS15410 WP_058207667.1 3172824..3173978(+) (tsaP) [Acinetobacter baumannii strain AC1633]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCCTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCACTTAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTTTCGGTATTATTCGCCGCTATACAGGTCAAACCACAAACC
TACAACCACAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCAGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGATTCAATTACCAACACACCTTATATTGTTGGTACCGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACTATTTATGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAACTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAACAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGCTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGATCGCGGTACAACTCAGGGCATTCAAGTAGGTCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTGATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTTTGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A505ZVD9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

98.958

100

0.99