Detailed information NTG0046840

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPLT_RS07355
• Genome accession: NC_017362
• Coordinates: 1508954..1510393 (-)
• Length: 479 a.a.
• NCBI ID: WP_000748985.1
• Uniprot ID: -
• Organism: Helicobacter pylori Lithuania75
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1503954..1515393

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPLT_RS07330 (HPLT_07580)	recG	1505080..1506951 (-)	1872	WP_001158400.1	ATP-dependent DNA helicase RecG	-
HPLT_RS07335 (HPLT_07585)	-	1507033..1507386 (+)	354	WP_000837016.1	hypothetical protein	-
HPLT_RS07340 (HPLT_07590)	-	1507390..1508025 (+)	636	WP_000668079.1	outer membrane protein	-
HPLT_RS07345 (HPLT_07595)	-	1508022..1508774 (-)	753	WP_000767545.1	exodeoxyribonuclease III	-
HPLT_RS07355 (HPLT_07600)	comH	1508954..1510393 (-)	1440	WP_000748985.1	hypothetical protein	Machinery gene
HPLT_RS07365 (HPLT_07605)	dnaA	1510614..1511981 (-)	1368	WP_000380603.1	chromosomal replication initiator protein DnaA	-
HPLT_RS07370 (HPLT_07610)	-	1512134..1512676 (+)	543	WP_000923021.1	hypothetical protein	-
HPLT_RS07375 (HPLT_07615)	-	1512719..1512958 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
HPLT_RS07380 (HPLT_07620)	glmS	1512959..1514752 (+)	1794	WP_000334382.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54860.78 Da
• Isoelectric Point: 6.8237

>NTDB_id=46840 HPLT_RS07355 WP_000748985.1 1508954..1510393(-) (comH) [Helicobacter pylori Lithuania75]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHSHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPEPKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNNTSNTGISENNESNENRDNVEKQAIRDPNVKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITQNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCIKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=46840 HPLT_RS07355 WP_000748985.1 1508954..1510393(-) (comH) [Helicobacter pylori Lithuania75]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATTAAAACTTCACCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACTCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAGCCCCATTCATCAC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGCCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTTTTTATAACGCCACCCACCGAAAAAACACTCCCTAACAACACCTCTAACACTGGTATTA
GTGAAAACAATGAAAGCAACGAAAATAGGGACAATGTGGAAAAACAAGCGATTAGAGATCCCAATGTTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGACGATGAAAACTTGCAAGCTTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTT
AAAACAAGCGTGGGAAAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAACGCCCCAAACAAGACGATC
AAATAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCAAAACGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAAGGGCATTATTTAAACGATATAATCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGAGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CTAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTGTGTATCAAAAAAGGGAATTATTTATTCAACGAAGTTTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	97.495	100	0.975