Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HZY77_RS13095 Genome accession   NZ_CP059257
Coordinates   2656199..2656612 (+) Length   137 a.a.
NCBI ID   WP_018507284.1    Uniprot ID   A0A5C7RMV5
Organism   MAG: Thiobacillus sp. isolate SSC5     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2651199..2661612
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZY77_RS13070 (HZY77_12905) hemL 2651701..2652978 (-) 1278 WP_296820915.1 glutamate-1-semialdehyde 2,1-aminomutase -
  HZY77_RS13075 (HZY77_12910) thiE 2653001..2653634 (-) 634 Protein_2581 thiamine phosphate synthase -
  HZY77_RS13080 (HZY77_12915) - 2653643..2654485 (-) 843 WP_296815516.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  HZY77_RS13085 (HZY77_12920) - 2654804..2654986 (+) 183 WP_296815519.1 rubredoxin -
  HZY77_RS13090 (HZY77_12925) - 2655163..2656053 (+) 891 WP_296815522.1 hypothetical protein -
  HZY77_RS13095 (HZY77_12930) pilG 2656199..2656612 (+) 414 WP_018507284.1 response regulator Regulator
  HZY77_RS13100 (HZY77_12935) - 2656634..2656999 (+) 366 WP_018507283.1 response regulator -
  HZY77_RS13105 (HZY77_12940) - 2657010..2657531 (+) 522 WP_296815523.1 chemotaxis protein CheW -
  HZY77_RS13110 (HZY77_12945) - 2657585..2659705 (+) 2121 WP_296815527.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 137 a.a.        Molecular weight: 15298.67 Da        Isoelectric Point: 6.4611

>NTDB_id=468181 HZY77_RS13095 WP_018507284.1 2656199..2656612(+) (pilG) [MAG: Thiobacillus sp. isolate SSC5]
MTLLEKRVDNEALKGVKVMVIDDSNTIRRSAEIFLNQAGCEVILAQDGFDALAKITDHEPDVVFVDIMMPRLDGYQTCSL
IKRNAKYRTTPVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDTLLTAVREHTCAGA

Nucleotide


Download         Length: 414 bp        

>NTDB_id=468181 HZY77_RS13095 WP_018507284.1 2656199..2656612(+) (pilG) [MAG: Thiobacillus sp. isolate SSC5]
ATGACCCTGCTGGAGAAACGTGTGGACAATGAAGCATTGAAAGGCGTCAAGGTGATGGTCATCGATGACAGCAACACCAT
ACGCCGCAGCGCAGAAATCTTCCTGAACCAGGCGGGCTGTGAAGTCATCCTGGCGCAGGACGGTTTCGACGCGCTGGCCA
AGATCACCGACCACGAGCCGGACGTGGTGTTTGTCGACATCATGATGCCGCGACTCGACGGCTACCAGACCTGCTCTCTG
ATCAAGCGCAATGCCAAGTACCGCACCACGCCCGTCATCATGCTGTCGTCCAAGGACGGATTGTTCGACCGGGCACGCGG
CCGCATGGTGGGGTCCGATGAATACCTGACCAAGCCGTTTACCAAGGATACGCTGCTGACGGCGGTGCGCGAGCATACGT
GCGCAGGCGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(18-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5C7RMV5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

68

91.241

0.62