Detailed information    

insolico Bioinformatically predicted

Overview

Name   recP/tkt   Type   Machinery gene
Locus tag   I6J38_RS06445 Genome accession   NZ_CP069558
Coordinates   1300508..1302484 (-) Length   658 a.a.
NCBI ID   WP_006268370.1    Uniprot ID   F9P7Y7
Organism   Streptococcus constellatus strain FDAARGOS_1208     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1295508..1307484
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J38_RS06420 (I6J38_06420) eeP 1296368..1297639 (-) 1272 WP_006268043.1 M50 family metallopeptidase Regulator
  I6J38_RS06425 (I6J38_06425) - 1297792..1298595 (-) 804 WP_006268086.1 phosphatidate cytidylyltransferase -
  I6J38_RS06430 (I6J38_06430) - 1298604..1299353 (-) 750 WP_020998060.1 isoprenyl transferase -
  I6J38_RS06435 (I6J38_06435) yajC 1299488..1299823 (-) 336 WP_006268523.1 preprotein translocase subunit YajC -
  I6J38_RS06440 (I6J38_06440) - 1299927..1300415 (-) 489 WP_006268254.1 prolyl-tRNA synthetase associated domain-containing protein -
  I6J38_RS06445 (I6J38_06445) recP/tkt 1300508..1302484 (-) 1977 WP_006268370.1 transketolase Machinery gene
  I6J38_RS06450 (I6J38_06450) ulaG 1302626..1303717 (-) 1092 WP_003035381.1 L-ascorbate 6-phosphate lactonase -
  I6J38_RS06455 (I6J38_06455) - 1303879..1305549 (-) 1671 WP_006268215.1 BglG family transcription antiterminator -
  I6J38_RS06460 (I6J38_06460) - 1305745..1306446 (-) 702 WP_020998061.1 L-ribulose-5-phosphate 4-epimerase -
  I6J38_RS06465 (I6J38_06465) - 1306448..1307308 (-) 861 WP_006270002.1 L-ribulose-5-phosphate 3-epimerase -

Sequence

Protein


Download         Length: 658 a.a.        Molecular weight: 71528.90 Da        Isoelectric Point: 5.0986

>NTDB_id=468151 I6J38_RS06445 WP_006268370.1 1300508..1302484(-) (recP/tkt) [Streptococcus constellatus strain FDAARGOS_1208]
MSNLSVNAIRFLGIDAIEKSKSGHPGVVMGAAPMAYDLFTKQMRINPEVPNWINRDRFVLSAGHGSMLLYALLHLSGFKD
VTMEEIKNFRQWGSKTPGHPEFGHTAGVDATTGPLGQGISMATGFAQAERFLAAKYNREGYNIFNHYTYVICGDGDLMEG
VSAEAASYAGLQKLDKLIVLYDSNDINLDGETKDSFTESVRDRYNAYGWHTALVKDGTDLEAINAAIEAAKVSGKPSLIE
VKTVIGYGSPNKQGTNAVHGAPLGAEEVAATRKALAWDYAPFEIPEEVYEDYRVNVAERGKAAYDVWEKLVEEYKQAYPD
LADEVAAIIAGKDPVEIKPEDFPVKETGLSQATRNSSQDALNAAAKVLPTFLGGSADLAHSNMTYIKEDGLQDDAHRLNR
NIQFGVREFAMGTILNGMALHGGLRVYGGTFFVFSDYVKAAVRLSALQGLPVTYVFTHDSIAVGEDGPTHEPIEHLAGLR
AIPNLTVFRPADARETQAAWYLALKSKTTPTALVLTRQNLTVEAETDFNKVAKGAYVVYETVGGFDTILLASGSEVNLAV
AAAKELEVQGEKVRVVSVPSTDIFDAQDVAYKEEILPNAVRRRVAIEMAATQSWYKYVGLDGSVIGIDKFGASAPAAKVM
KEYGFTVEHIVEVVKNLK

Nucleotide


Download         Length: 1977 bp        

>NTDB_id=468151 I6J38_RS06445 WP_006268370.1 1300508..1302484(-) (recP/tkt) [Streptococcus constellatus strain FDAARGOS_1208]
ATGTCAAATTTATCTGTCAACGCCATTCGTTTTTTAGGAATTGATGCCATTGAAAAATCAAAATCTGGTCACCCAGGTGT
TGTCATGGGCGCAGCTCCGATGGCTTATGACTTGTTTACCAAGCAAATGCGCATCAATCCAGAAGTGCCAAATTGGATCA
ATCGCGATCGTTTTGTTTTATCAGCTGGTCACGGCTCTATGTTACTCTATGCCCTTCTCCATTTGTCTGGTTTTAAAGAT
GTCACAATGGAAGAAATCAAGAACTTCCGTCAATGGGGTTCTAAAACGCCTGGGCATCCCGAATTTGGACATACTGCTGG
TGTAGATGCGACAACTGGTCCACTTGGTCAAGGAATTTCTATGGCAACTGGTTTTGCACAAGCAGAACGTTTTTTAGCAG
CAAAATACAATCGTGAAGGCTATAATATCTTTAACCACTATACCTATGTCATCTGTGGTGACGGGGACTTAATGGAAGGT
GTGTCTGCTGAAGCGGCTTCTTATGCTGGACTGCAAAAGCTAGATAAGCTCATCGTTCTCTATGATTCAAACGACATCAA
TTTGGACGGAGAAACGAAAGATTCCTTTACAGAAAGTGTTCGTGACCGTTACAATGCTTACGGCTGGCACACAGCTTTGG
TCAAAGACGGAACAGACTTAGAAGCAATCAATGCGGCGATTGAAGCCGCAAAAGTTTCTGGCAAACCTTCCTTGATTGAA
GTCAAAACGGTGATTGGTTATGGCTCACCAAATAAACAAGGGACAAATGCTGTTCATGGAGCGCCTCTTGGTGCGGAAGA
AGTAGCGGCTACTCGCAAAGCCCTTGCTTGGGATTACGCACCATTTGAAATTCCAGAAGAAGTCTACGAAGATTATCGAG
TTAATGTTGCAGAACGCGGCAAAGCTGCCTATGATGTTTGGGAAAAACTCGTTGAAGAATACAAACAAGCCTATCCTGAC
TTAGCTGATGAAGTTGCTGCCATTATTGCTGGAAAAGATCCAGTTGAGATCAAACCAGAAGATTTCCCAGTAAAAGAAAC
AGGTCTTTCACAAGCTACTCGTAATTCTAGCCAAGATGCTTTGAATGCTGCCGCAAAAGTTCTCCCAACTTTCCTTGGTG
GCTCTGCTGACCTCGCTCATTCTAATATGACTTACATCAAAGAAGATGGCTTGCAAGATGATGCCCACCGTCTTAACCGC
AATATTCAATTCGGTGTGCGTGAATTTGCTATGGGTACTATTTTGAATGGTATGGCACTTCACGGAGGACTTCGTGTTTA
TGGCGGTACGTTCTTTGTCTTCTCAGACTATGTTAAAGCGGCTGTTCGCTTATCAGCCCTTCAAGGCTTACCTGTGACTT
ATGTCTTTACGCATGACTCAATTGCAGTTGGTGAGGATGGTCCAACTCATGAACCAATTGAGCATTTAGCTGGACTTCGT
GCTATTCCGAATCTCACTGTTTTCCGTCCAGCGGATGCGCGTGAAACACAGGCGGCTTGGTACTTGGCACTGAAAAGTAA
AACAACTCCAACGGCGTTGGTTCTTACTCGTCAAAACTTGACTGTTGAAGCTGAAACTGACTTTAACAAGGTAGCAAAAG
GCGCTTATGTGGTGTATGAAACAGTAGGTGGTTTTGATACAATTCTTCTTGCATCTGGTTCTGAAGTCAACTTAGCTGTT
GCAGCTGCAAAAGAGTTGGAAGTACAAGGGGAAAAAGTTCGCGTTGTCAGTGTACCATCAACAGACATCTTTGATGCACA
AGACGTTGCTTACAAAGAAGAAATTCTACCAAATGCAGTCCGCCGCCGTGTTGCCATTGAAATGGCTGCAACCCAATCTT
GGTACAAATATGTTGGACTTGACGGTTCTGTTATCGGTATTGATAAATTCGGTGCTTCTGCTCCAGCAGCTAAAGTAATG
AAAGAGTACGGTTTCACAGTTGAACATATCGTTGAGGTTGTGAAAAACTTGAAATAA

Domains

Predicted by InterProScan.

Transketolase, pyrimidine binding domain (Transket_pyr)

(352-521)

Transketolase, thiamine diphosphate binding domain (Transketolase_N)

(3-334)

Transketolase, C-terminal domain (Transketolase_C)

(543-650)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9P7Y7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

79.604

99.848

0.795