Detailed information NTG0468113

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: I6J38_RS02155
• Genome accession: NZ_CP069558
• Coordinates: 441912..443021 (+)
• Length: 369 a.a.
• NCBI ID: WP_020997774.1
• Uniprot ID: U2ZGR2
• Organism: Streptococcus constellatus strain FDAARGOS_1208
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 436912..448021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J38_RS02135 (I6J38_02135)	-	438812..439150 (+)	339	WP_003069168.1	ATP cone domain-containing protein	-
I6J38_RS02140 (I6J38_02140)	rpsU	439312..439488 (+)	177	WP_000048054.1	30S ribosomal protein S21	-
I6J38_RS02145 (I6J38_02145)	mscL	439602..439979 (-)	378	WP_006267895.1	large conductance mechanosensitive channel protein MscL	-
I6J38_RS02150 (I6J38_02150)	dnaG	440134..441909 (+)	1776	WP_022525636.1	DNA primase	-
I6J38_RS02155 (I6J38_02155)	rpoS	441912..443021 (+)	1110	WP_020997774.1	RNA polymerase sigma factor RpoD	Regulator
I6J38_RS02160 (I6J38_02160)	-	443040..443369 (+)	330	WP_003069160.1	metal-sulfur cluster assembly factor	-
I6J38_RS02165 (I6J38_02165)	brnQ	443512..444840 (+)	1329	WP_006269526.1	branched-chain amino acid transport system II carrier protein	-
I6J38_RS02170 (I6J38_02170)	ccdA2	444982..445692 (+)	711	WP_006267815.1	thiol-disulfide oxidoreductase-associated membrane protein CcdA2	-
I6J38_RS02175 (I6J38_02175)	-	445709..446293 (+)	585	WP_020997775.1	redoxin family protein	-
I6J38_RS02180 (I6J38_02180)	msrB	446306..447415 (+)	1110	WP_006267871.1	peptide-methionine (R)-S-oxide reductase MsrB	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42266.91 Da
• Isoelectric Point: 4.4765

>NTDB_id=468113 I6J38_RS02155 WP_020997774.1 441912..443021(+) (rpoS) [Streptococcus constellatus strain FDAARGOS_1208]
MATKQKEVTTFDVQVAEFIRNHKKTGTATDDEINDQLVIPFTLNADGIEDLLQRIQDAGIAITDKEGNPSERVLNTEEEA
ELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQELAVLVEQGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLDL
IQEGNMGLMKAVDKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA
ERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQLDEVLDTLTDREENVLRLRFG
LDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED

Nucleotide

• Length: 1110 bp

>NTDB_id=468113 I6J38_RS02155 WP_020997774.1 441912..443021(+) (rpoS) [Streptococcus constellatus strain FDAARGOS_1208]
ATGGCTACAAAACAAAAAGAAGTAACAACTTTTGATGTTCAAGTTGCAGAATTTATTCGCAACCATAAAAAAACTGGTAC
AGCAACCGATGATGAGATTAATGATCAATTAGTCATTCCATTTACTTTAAATGCTGATGGTATTGAGGATCTTCTTCAAC
GAATTCAGGACGCAGGGATTGCTATTACGGATAAAGAGGGCAACCCAAGTGAACGGGTTTTAAATACAGAGGAAGAAGCT
GAATTAACAGACGAGGAGTTGCTTGGTAGCAATTCTGCTAAAGTAAACGACCCTGTCCGTATGTATTTAAAGGAAATTGG
TGTTGTTCCGCTGTTGACCAATGAAGAAGAGCAAGAATTAGCTGTCCTCGTGGAACAAGGCGATTTAGAAGCCAAGCAAC
GTTTGGCGGAAGCTAATTTGCGGTTGGTCGTTTCCATCGCTAAGCGCTATGTTGGGCGTGGCATGCAGTTTCTCGACTTG
ATTCAAGAAGGAAATATGGGATTGATGAAAGCTGTTGATAAGTTTGACTATACTAAAGGTTTCAAATTTTCAACATATGC
TACTTGGTGGATTCGTCAAGCGATTACTCGTGCGATTGCTGATCAAGCTCGTACGATTCGGATTCCGGTTCACATGGTTG
AAACGATTAATAAATTAGTGCGGGAACAACGAAATCTTTTACAAGAATTGGGACAAGATCCAACACCAGAGCAAATTGCA
GAGCGGATGGATATGACGCCTGATAAAGTCCGTGAAATTTTGAAGATTGCACAAGAACCTGTTTCTCTTGAAACACCAAT
TGGAGAGGAAGATGATAGTCATTTGGGTGATTTCATTGAGGATGAGGTTATTGAAAATCCAGTTGATTATACAACGCGTA
TCGTTTTGCGTGAGCAATTAGATGAAGTTCTTGATACATTAACAGACCGTGAAGAAAATGTGCTGCGTCTGCGTTTTGGG
CTAGATGATGGGAAAATGCGTACACTGGAAGATGTTGGAAAAGTATTTAACGTAACTCGTGAACGGATTCGACAAATTGA
GGCTAAAGCCCTGCGCAAATTGCGTCATCCAAGTCGTAGCAAACCGCTTCGTGACTTTATTGAGGATTAG

Domains

Predicted by InterProScan.

• Sigma-70 factor, region 1.1 (Sigma70_r1_1) (14-85)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (97-129)

• Sigma-70, region 4 (Sigma70_r4) (303-356)

• Sigma-70 region 2 (Sigma70_r2) (135-204)

• Sigma-70 region 3 (Sigma70_r3) (214-290)

3D structure

• AlphaFold DB: U2ZGR2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	46.416	79.404	0.369