Detailed information    

insolico Bioinformatically predicted

Overview


Name   rexA   Type   Machinery gene
Locus tag   I6J38_RS01160 Genome accession   NZ_CP069558
Coordinates   242555..246235 (+) Length   1226 a.a.
NCBI ID   WP_020997711.1    Uniprot ID   U2YA87
Organism   Streptococcus constellatus strain FDAARGOS_1208     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 237555..251235
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J38_RS01150 (I6J38_01150) - 237948..239162 (+) 1215 WP_006267100.1 ABC transporter permease -
  I6J38_RS01155 (I6J38_01155) rexB 239283..242558 (+) 3276 WP_006267494.1 ATP-dependent nuclease subunit B Machinery gene
  I6J38_RS01160 (I6J38_01160) rexA 242555..246235 (+) 3681 WP_020997711.1 helicase-exonuclease AddAB subunit AddA Machinery gene
  I6J38_RS01165 (I6J38_01165) glgB 246705..248615 (+) 1911 WP_006267608.1 1,4-alpha-glucan branching protein GlgB -
  I6J38_RS01170 (I6J38_01170) - 248619..249761 (+) 1143 WP_003025294.1 glucose-1-phosphate adenylyltransferase -
  I6J38_RS01175 (I6J38_01175) glgD 249751..250890 (+) 1140 WP_020997712.1 glucose-1-phosphate adenylyltransferase subunit GlgD -

Sequence


Protein


Download         Length: 1226 a.a.        Molecular weight: 141556.55 Da        Isoelectric Point: 5.6332

>NTDB_id=468103 I6J38_RS01160 WP_020997711.1 242555..246235(+) (rexA) [Streptococcus constellatus strain FDAARGOS_1208]
MRQIPFLTQAEIRALQDQEVQSDKVQKRTVEQIEAIYSSGQNILVSASAGSGKTFVMVQRIIDQIMRGVRIEQLFISTFT
VKAASELKERLEKELSKALKETNDEELKQHLAQQLADIPNADIGTMDSFTQKVLNKYGYLLELAPNFRILQNASEQLLLQ
NEVFEQVFEDFYQSDQATLFKKLVKNFTGQRKDLLGFREQVYKIYSFLQSTSSPIEWLEKDFLKGYEFADFQEEKAQLLA
QTKEALFDLEDFFSYHLVHEAKEFPKARYLENVQRVLDDLASLQGQSSEEAYLTALNNIVEISRVSNGKALTNSGRKEEL
KEIINAYNEKRKEKIQVLRDLADQFYRFEFQLTYHEEAKEILLVLQQFMKLFVTSYLNRKKEENAFEFTDISHFAIQILE
ECSDVRQFYRNKYHEVMVDEYQDTNHTQERMLELLSNGDNRFMVGDIKQSIYRFRQADPQIFNEKFKTYKEDSRQGKLIV
LKENFRSHLEVLEATNDVFKRLMDEEVGEIDYNETHYLVAGNPDKKEPNPLYQTEFLIYDGALEADKEENDKEVSSVSAG
EVELVIKEIIRLYNEENVQFEDITLLTASRTRNDVILAEFAKYGIPVVSDGGEDNYLQSVEVMVMLDTLRTINNPLNDYA
LVALLKSPMFNFTEDELARLALQKKVTETNYVVHQENLYEKLKNALNGYGQYPELITPPLLKKIQQFQGTLQAWREYAKT
NSLYDLLWKIYQDRFYYDYVGALPNGAGRQANLYALTLRANDYEKMSFKGLSRFIGMIDKILETQNDLASVVSAAPKHAV
RLMTVHKSKGLEFKYVFLLNMDKVFNRKDSSSALILSRQNGVGIKYVADVAVDVADKLAPNHVRLSIDTLPYEQNEREIH
LASISEQMRLLYVAMTRAERKLYLVGKGHKNSLEKKSFPTPVKGHLAASIRQSMTSFQDWMWTLHVVFEKDNLAFSTRFV
TDSDLTSEKIGQLKLKHAVIEEDLIDNRQSEDIRRALDILENVDRLNTKYQAAIRLPSVRTPSQIKKFYEPIMDTDGVEI
MEKRNPTIVGKASFELPNFAKKAPVTGAQIGSAVHELMQRIPLVQAPTIAILRKVLKQVQAEESVKKKIDLQKIASFFGT
ELGQLLLKHTDRVYREAPFAMLKQDPASGQYFVVRGILDGYLLLTDRIILFDYKTDRYTNPSELVERYQAQLALYAEALS
RSYSIEKVEKYLVLLGGAQLQVVKVE

Nucleotide


Download         Length: 3681 bp        

>NTDB_id=468103 I6J38_RS01160 WP_020997711.1 242555..246235(+) (rexA) [Streptococcus constellatus strain FDAARGOS_1208]
ATGAGACAAATTCCATTTTTGACTCAAGCAGAGATTCGTGCTTTGCAGGATCAGGAAGTTCAGTCTGACAAAGTTCAAAA
ACGTACAGTAGAACAGATTGAAGCCATTTACTCTTCCGGTCAAAATATTCTGGTTTCTGCTTCTGCGGGATCAGGAAAAA
CCTTTGTTATGGTGCAGCGGATTATTGACCAAATTATGCGGGGAGTTCGTATTGAGCAGCTCTTCATTTCAACTTTCACC
GTCAAAGCAGCTAGTGAATTAAAAGAGCGCTTGGAGAAAGAGCTGTCCAAGGCTTTGAAAGAAACAAATGATGAGGAACT
TAAACAACACTTGGCTCAGCAATTAGCCGATATTCCGAATGCAGATATTGGAACCATGGACTCTTTTACCCAAAAAGTCC
TGAATAAATATGGTTATCTATTGGAATTGGCGCCAAATTTTCGCATTTTGCAAAATGCGAGTGAGCAGTTATTGCTACAA
AACGAAGTTTTTGAGCAAGTTTTTGAAGACTTCTATCAATCTGATCAGGCTACTTTGTTTAAAAAATTAGTCAAAAACTT
TACAGGTCAGAGAAAAGATTTGCTTGGTTTTCGCGAGCAGGTTTATAAGATTTATTCTTTCTTGCAGTCTACTAGTAGTC
CAATAGAATGGTTGGAAAAAGACTTTTTGAAAGGCTATGAGTTTGCAGATTTCCAAGAAGAAAAAGCGCAACTTTTAGCA
CAAACAAAAGAAGCCCTCTTTGATTTAGAAGATTTTTTTAGCTATCATTTGGTTCATGAAGCCAAGGAATTTCCCAAAGC
AAGATATCTTGAAAATGTGCAGCGTGTGCTTGATGACCTGGCAAGCTTACAAGGACAATCCTCTGAGGAAGCCTATCTCA
CAGCGCTCAATAACATTGTAGAAATATCGCGGGTCAGCAATGGGAAAGCCTTGACGAACAGCGGACGAAAAGAAGAATTA
AAAGAAATTATCAACGCCTATAACGAAAAACGCAAAGAAAAAATTCAAGTTTTACGAGACTTGGCAGATCAATTTTATCG
TTTTGAATTTCAATTGACCTACCATGAGGAAGCAAAAGAAATTTTACTTGTTTTGCAACAATTTATGAAATTGTTTGTTA
CAAGCTATTTGAATCGCAAAAAAGAAGAAAATGCTTTTGAATTTACGGACATTAGTCATTTTGCTATTCAGATCTTAGAA
GAATGTTCGGATGTGCGTCAGTTTTATAGGAACAAATACCATGAAGTTATGGTAGATGAATATCAAGATACTAACCACAC
GCAAGAGCGGATGCTAGAACTGTTATCAAATGGGGATAATCGCTTTATGGTGGGGGATATTAAACAGTCTATTTACCGTT
TTCGTCAAGCGGATCCGCAGATTTTCAATGAGAAATTCAAAACCTATAAAGAAGATAGCAGACAAGGAAAATTGATTGTT
TTAAAAGAGAATTTTCGCAGTCATTTGGAAGTCTTGGAAGCCACCAATGATGTGTTTAAGCGCCTCATGGATGAGGAAGT
GGGAGAAATTGATTACAATGAAACGCATTATCTGGTCGCTGGAAATCCTGATAAAAAAGAACCAAATCCCTTGTATCAGA
CAGAATTTCTCATTTATGATGGAGCGCTTGAAGCGGATAAGGAGGAGAATGACAAGGAGGTTTCTTCTGTTTCTGCAGGA
GAAGTAGAACTGGTAATTAAAGAAATTATTCGCCTGTACAATGAAGAAAATGTCCAATTTGAGGATATTACTTTGCTAAC
GGCTTCGCGGACGCGCAACGATGTGATTTTAGCTGAATTTGCTAAATATGGTATTCCTGTCGTTTCAGACGGTGGTGAGG
ACAATTACCTTCAGTCTGTTGAAGTCATGGTGATGTTAGACACCTTGCGTACAATTAACAACCCTCTCAATGATTATGCT
TTAGTGGCGCTTTTAAAATCGCCAATGTTTAACTTTACAGAAGATGAATTGGCACGTTTAGCTTTGCAAAAGAAGGTGAC
TGAGACAAATTATGTTGTCCATCAGGAAAATCTCTATGAGAAGTTGAAGAATGCTCTGAATGGGTACGGGCAATATCCTG
AACTTATCACGCCTCCTCTTTTAAAAAAAATCCAGCAATTTCAAGGAACACTACAGGCTTGGCGAGAGTATGCAAAAACA
AATTCACTATATGATTTGCTTTGGAAAATTTATCAAGATCGCTTTTATTACGATTATGTGGGAGCTTTACCAAATGGAGC
GGGACGTCAAGCTAATCTCTATGCCCTTACTTTGCGCGCAAATGATTACGAAAAAATGAGTTTTAAAGGCTTGTCACGTT
TTATCGGGATGATTGATAAAATCTTGGAAACACAGAATGATTTAGCTAGTGTAGTTAGTGCAGCTCCGAAACATGCGGTT
CGCCTGATGACGGTTCATAAGAGCAAAGGTTTGGAATTTAAATATGTCTTTTTGCTCAATATGGACAAAGTATTTAATCG
TAAAGATAGCAGTTCCGCTTTGATTCTCAGTCGTCAAAATGGTGTTGGAATCAAGTATGTGGCTGATGTAGCAGTAGATG
TTGCTGATAAGTTAGCTCCAAACCATGTTCGTTTGTCTATTGATACTCTGCCTTATGAGCAAAATGAACGTGAGATTCAT
TTAGCCAGCATTTCGGAACAAATGCGTCTACTCTATGTCGCCATGACACGCGCTGAAAGGAAACTGTATTTAGTTGGTAA
AGGTCATAAGAACAGTTTGGAGAAAAAAAGCTTCCCTACTCCAGTGAAGGGGCATTTAGCTGCATCTATCAGGCAAAGTA
TGACAAGTTTTCAAGATTGGATGTGGACTTTACATGTAGTATTTGAGAAAGATAATCTAGCTTTTTCAACGCGATTTGTG
ACAGATAGTGACTTGACAAGTGAAAAAATAGGTCAACTGAAATTGAAACATGCGGTTATTGAAGAGGATTTAATAGACAA
TCGCCAATCTGAGGATATTCGTAGGGCTTTGGATATTTTGGAAAATGTAGATCGACTGAATACCAAGTATCAAGCTGCCA
TCCGTTTACCGAGTGTTCGAACACCGAGTCAAATTAAGAAATTTTATGAACCGATTATGGATACAGACGGCGTTGAAATT
ATGGAGAAAAGGAATCCGACCATTGTAGGAAAAGCTTCTTTTGAGCTACCAAATTTTGCTAAAAAAGCTCCAGTTACAGG
AGCGCAAATCGGTAGCGCTGTCCATGAACTGATGCAGCGTATTCCTTTGGTTCAAGCCCCTACGATAGCTATTTTGAGAA
AAGTTTTAAAACAGGTTCAGGCAGAAGAAAGTGTTAAAAAGAAAATTGATTTGCAAAAGATAGCTAGTTTTTTTGGGACT
GAACTTGGGCAGCTCCTTTTGAAGCATACAGACAGAGTATATCGTGAAGCTCCTTTTGCTATGTTAAAGCAGGATCCAGC
AAGTGGACAATATTTTGTAGTCCGTGGGATTCTGGACGGTTATCTACTGCTGACGGACCGAATCATTCTCTTTGATTACA
AGACGGATCGATATACAAATCCAAGTGAATTAGTGGAGCGCTACCAAGCACAATTAGCACTTTATGCTGAAGCTCTTAGT
CGTTCATACAGTATTGAAAAAGTTGAAAAATACTTAGTGTTGTTAGGCGGAGCACAGCTTCAAGTGGTGAAAGTAGAATA
G


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB U2YA87

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rexA Streptococcus pneumoniae R6

60.408

99.918

0.604