Detailed information NTG0046784

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HMPREF4655_RS00580
• Genome accession: NC_017360
• Coordinates: 118510..119943 (-)
• Length: 477 a.a.
• NCBI ID: WP_000751669.1
• Uniprot ID: -
• Organism: Helicobacter pylori 35A
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 113510..124943

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HMPREF4655_RS00555 (HMPREF4655_20116)	recG	114644..116509 (-)	1866	WP_001158392.1	ATP-dependent DNA helicase RecG	-
HMPREF4655_RS00560 (HMPREF4655_20117)	-	116591..116944 (+)	354	WP_000837005.1	hypothetical protein	-
HMPREF4655_RS00565 (HMPREF4655_20118)	-	116948..117583 (+)	636	WP_000668051.1	outer membrane protein	-
HMPREF4655_RS00570 (HMPREF4655_20119)	-	117580..118332 (-)	753	WP_000767501.1	exodeoxyribonuclease III	-
HMPREF4655_RS00580 (HMPREF4655_20120)	comH	118510..119943 (-)	1434	WP_000751669.1	hypothetical protein	Machinery gene
HMPREF4655_RS00590 (HMPREF4655_20121)	dnaA	120165..121532 (-)	1368	WP_000380580.1	chromosomal replication initiator protein DnaA	-
HMPREF4655_RS00595 (HMPREF4655_20122)	-	121684..122220 (+)	537	WP_000923119.1	purine-nucleoside phosphorylase	-
HMPREF4655_RS00600 (HMPREF4655_20123)	-	122267..122506 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HMPREF4655_RS00605 (HMPREF4655_20124)	glmS	122507..124300 (+)	1794	WP_000334358.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 54677.71 Da
• Isoelectric Point: 7.4336

>NTDB_id=46784 HMPREF4655_RS00580 WP_000751669.1 118510..119943(-) (comH) [Helicobacter pylori 35A]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHQIPSLNAPIQKPQNKPTSSQQSLQNFPYTESKLGSKNPKNSLLQPLAT
PNKISSVNEVKTPTNDTKPPLKHSSEDQENNLFIAPPTEKTLPNNTPNANINEHNESNENRDNVEKQAIRDPNVKEFACG
KWVYDDENLQAYRPSILKRIDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFIILQARSS
TEKCKRARARKDGTTRQCYLIEEPLKQAWESKYEITTQLVKATYERPKQDDQIEPTFYETSELAYSSTRKSEITHNELNL
NEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSKVICVKKGNYLFNEV

Nucleotide

• Length: 1434 bp

>NTDB_id=46784 HMPREF4655_RS00580 WP_000751669.1 118510..119943(-) (comH) [Helicobacter pylori 35A]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACCAAATACCTTCTTTAAACGCACCCATACAAAAACCACAAAATAAACCCACTTCATCGCAACAAT
CTCTTCAAAACTTTCCTTACACAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTAGCCACT
CCTAATAAAATAAGCTCCGTTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTCAGAAGA
TCAAGAAAACAACCTCTTTATAGCGCCACCCACTGAAAAAACGCTTCCTAACAACACCCCTAACGCTAATATTAATGAAC
ACAATGAAAGCAATGAAAATAGGGATAATGTGGAAAAACAAGCCATTAGAGATCCTAATGTTAAAGAATTTGCGTGCGGG
AAGTGGGTCTATGATGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCATTGATGAAGACAAACAGACTGC
GACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAATCTCTG
TTCATAAAACAGAGCCTTTAGAAGAGCCACAAACCTTTGAAGCTAAAAACAATTTTATCATTCTCCAAGCCAGAAGCTCT
ACAGAAAAATGCAAAAGAGCCAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTTAAAACA
AGCGTGGGAGAGCAAGTATGAAATCACCACGCAATTAGTGAAAGCCACTTATGAGCGCCCCAAACAAGACGATCAAATAG
AGCCAACTTTCTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTGAATTTG
AATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGAATACAA
AGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAGCCAAAA
GCACGCCCTTGAGTATTGAAAACTCTAAAGTTATTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.858	100	0.922