Detailed information NTG0046781

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPSAT_RS07165
• Genome accession: NC_017359
• Coordinates: 1474965..1476404 (-)
• Length: 479 a.a.
• NCBI ID: WP_000751656.1
• Uniprot ID: -
• Organism: Helicobacter pylori Sat464
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1469965..1481404

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPSAT_RS07140 (HPSAT_07325)	recG	1471107..1472972 (-)	1866	WP_001158383.1	ATP-dependent DNA helicase RecG	-
HPSAT_RS07145 (HPSAT_07330)	-	1473054..1473398 (+)	345	WP_000837012.1	hypothetical protein	-
HPSAT_RS07150 (HPSAT_07335)	-	1473402..1474037 (+)	636	WP_000668049.1	outer membrane protein	-
HPSAT_RS07155 (HPSAT_07340)	-	1474034..1474786 (-)	753	WP_000780313.1	exodeoxyribonuclease III	-
HPSAT_RS07165 (HPSAT_07345)	comH	1474965..1476404 (-)	1440	WP_000751656.1	hypothetical protein	Machinery gene
HPSAT_RS07170 (HPSAT_07350)	dnaA	1476625..1477992 (-)	1368	WP_000380576.1	chromosomal replication initiator protein DnaA	-
HPSAT_RS07175 (HPSAT_07355)	-	1478144..1478686 (+)	543	WP_000922940.1	purine-nucleoside phosphorylase	-
HPSAT_RS07180 (HPSAT_07360)	-	1478722..1478961 (+)	240	WP_000461848.1	DUF2443 domain-containing protein	-
HPSAT_RS07185 (HPSAT_07365)	glmS	1478962..1480755 (+)	1794	WP_000334361.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
HPSAT_RS07190 (HPSAT_07370)	thyX	1480776..1481402 (+)	627	WP_000451952.1	FAD-dependent thymidylate synthase	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 55010.05 Da
• Isoelectric Point: 7.1642

>NTDB_id=46781 HPSAT_RS07165 WP_000751656.1 1474965..1476404(-) (comH) [Helicobacter pylori Sat464]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTPSQQSLQNFSYPESKLDSKNPKNSLLQPL
ATLNKTSLANEVKTPTNDTKPPLKHSSQDQENNLFVTPPTEKTLPNNTPNADINEHNESNENRDNAQKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVQKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQIEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=46781 HPSAT_RS07165 WP_000751656.1 1474965..1476404(-) (comH) [Helicobacter pylori Sat464]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTACACCCGCACCAAATGCCTTCTTTAAACGCACCCATACAAAAACCACAAAACAAACCCACTCCATCGC
AACAATCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGACTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCTTAATAAAACAAGCCTTGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAACAATCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ACGAACACAATGAAAGCAATGAGAATAGGGATAATGCGCAAAAACAAGCCATTAGAGATCCTAATATCAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCAACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCAAAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCCAGAGCGCGAAAAGACGGCACGACTAGGCAATGTTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCTGTATATGAGCGCCCCAAACAAGACGATC
AAATAGAGCCGACTTTCTATGAAACCAGCGAACTAGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.067	100	0.921