Detailed information NTG0046759

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPCU_RS07505
• Genome accession: NC_017358
• Coordinates: 1548961..1550394 (-)
• Length: 477 a.a.
• NCBI ID: WP_000751671.1
• Uniprot ID: A0AB32XA13
• Organism: Helicobacter pylori Cuz20
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1543961..1555394

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPCU_RS07480 (HPCU_07655)	recG	1545104..1546969 (-)	1866	WP_001158382.1	ATP-dependent DNA helicase RecG	-
HPCU_RS07485 (HPCU_07660)	-	1547051..1547395 (+)	345	WP_000837008.1	hypothetical protein	-
HPCU_RS07490 (HPCU_07665)	-	1547399..1548034 (+)	636	WP_000668043.1	outer membrane protein	-
HPCU_RS07495 (HPCU_07670)	-	1548031..1548783 (-)	753	WP_000767491.1	exodeoxyribonuclease III	-
HPCU_RS07505 (HPCU_07675)	comH	1548961..1550394 (-)	1434	WP_000751671.1	hypothetical protein	Machinery gene
HPCU_RS07515 (HPCU_07680)	dnaA	1550615..1551982 (-)	1368	WP_000380574.1	chromosomal replication initiator protein DnaA	-
HPCU_RS07520 (HPCU_07685)	-	1552135..1552671 (+)	537	WP_014534326.1	purine-nucleoside phosphorylase	-
HPCU_RS07525 (HPCU_07690)	-	1552718..1552957 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HPCU_RS07530 (HPCU_07695)	glmS	1552958..1554751 (+)	1794	WP_000334329.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 54717.58 Da
• Isoelectric Point: 6.8970

>NTDB_id=46759 HPCU_RS07505 WP_000751671.1 1548961..1550394(-) (comH) [Helicobacter pylori Cuz20]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHQMPSLNAPIQKPQNKPTPSQQPLQNFSYPESKLGSKNPKNSLLQPLAT
PNKTSSANEVKTPTNDTKPPLKHPSEDQENNLFVTPPTEKTLPNNTPNADINEHNESNENRDNAEKQAIRDPNVREFACG
KWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVQKTEPLEDPQTFEAKNNFTILQARSS
TEKCKRARTRKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQTEPTFYETSELAYSSTRKSEITRNELNL
NEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1434 bp

>NTDB_id=46759 HPCU_RS07505 WP_000751671.1 1548961..1550394(-) (comH) [Helicobacter pylori Cuz20]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAAGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCCAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCACACCAAATGCCTTCTTTAAACGCACCCATACAAAAACCACAAAACAAACCCACTCCATCGCAACAAC
CTCTTCAAAACTTTTCTTATCCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTAGCCACT
CCTAATAAAACAAGTTCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATCCTTCAGAAGA
TCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTAATGAAC
ACAATGAAAGCAATGAGAATAGGGATAATGCGGAAAAACAAGCCATTAGAGATCCTAATGTTAGAGAATTTGCATGCGGG
AAATGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACAGACTGC
GACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAATCTCTG
TTCAAAAAACAGAGCCTTTAGAAGATCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGAAGCTCT
ACAGAAAAATGCAAAAGGGCCAGAACGCGAAAAGACGGCACGACTAGACAATGCTATCTGATAGAAGAGCCTTTAAAACA
AGCGTGGGAAAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAACGCCCCAAACAAGACGATCAAACAG
AGCCGACTTTCTATGAAACCAGCGAACTAGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTGAATTTG
AATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAAGGGCATTATTTAAACGATATAATCAAAGAAAGCAGTGAATACAA
AGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAGCCAAAA
GCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.276	100	0.927