Detailed information NTG0467577

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: H0232_RS05535
• Genome accession: NZ_CP059160
• Coordinates: 1084017..1084967 (+)
• Length: 316 a.a.
• NCBI ID: WP_002853794.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain OBT12390
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1079017..1089967

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0232_RS05510 (H0232_05510)	neuB	1079516..1080556 (+)	1041	WP_002852665.1	N-acetylneuraminate synthase	-
H0232_RS05515 (H0232_05515)	neuC	1080553..1081671 (+)	1119	WP_002852786.1	UDP-N-acetylglucosamine 2-epimerase	-
H0232_RS05520 (H0232_05520)	-	1081668..1082333 (+)	666	WP_180819930.1	acylneuraminate cytidylyltransferase family protein	-
H0232_RS05525 (H0232_05525)	-	1082321..1083154 (+)	834	WP_002854028.1	CatB-related O-acetyltransferase	-
H0232_RS05530 (H0232_05530)	-	1083146..1083958 (-)	813	WP_002854116.1	glycosyltransferase family 2 protein	-
H0232_RS05535 (H0232_05535)	waaF	1084017..1084967 (+)	951	WP_002853794.1	glycosyltransferase family 9 protein	Regulator
H0232_RS05540 (H0232_05540)	-	1084953..1085716 (-)	764	Protein_1072	glycosyltransferase family 25 protein	-
H0232_RS05545 (H0232_05545)	gmhA	1085716..1086276 (-)	561	WP_002787744.1	D-sedoheptulose 7-phosphate isomerase	-
H0232_RS05550 (H0232_05550)	rfaE1	1086273..1087658 (-)	1386	WP_002853608.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
H0232_RS05555 (H0232_05555)	rfaD	1087651..1088604 (-)	954	WP_002853798.1	ADP-glyceromanno-heptose 6-epimerase	-
H0232_RS05560 (H0232_05560)	gmhB	1088605..1089165 (-)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
H0232_RS05565 (H0232_05565)	-	1089247..1089549 (+)	303	WP_002852762.1	cytochrome c	-
H0232_RS05570 (H0232_05570)	ccoS	1089572..1089778 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36225.73 Da
• Isoelectric Point: 10.2421

>NTDB_id=467577 H0232_RS05535 WP_002853794.1 1084017..1084967(+) (waaF) [Campylobacter jejuni subsp. jejuni strain OBT12390]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENATLVHLDLACMPCMQKTCPLKHHKCMKDLKPEVIVKAIQNLTNI

Nucleotide

• Length: 951 bp

>NTDB_id=467577 H0232_RS05535 WP_002853794.1 1084017..1084967(+) (waaF) [Campylobacter jejuni subsp. jejuni strain OBT12390]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAACATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAGTGATTGTAAAAGCGATTCAAAATTTAACTAATATCTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	93.61	99.051	0.927