Detailed information NTG0046739

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPV225_RS06945
• Genome accession: NC_017355
• Coordinates: 1439745..1441184 (+)
• Length: 479 a.a.
• NCBI ID: WP_000751673.1
• Uniprot ID: -
• Organism: Helicobacter pylori v225d
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1434745..1446184

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPV225_RS06925 (HPV225_1487)	glmS	1435376..1437169 (-)	1794	WP_000334360.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
HPV225_RS06930 (HPV225_1488)	-	1437170..1437409 (-)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HPV225_RS06935 (HPV225_1489)	-	1437456..1437992 (-)	537	WP_000922943.1	hypothetical protein	-
HPV225_RS06940 (HPV225_1490)	dnaA	1438144..1439511 (+)	1368	WP_000380592.1	chromosomal replication initiator protein DnaA	-
HPV225_RS06945 (HPV225_1491)	comH	1439745..1441184 (+)	1440	WP_000751673.1	hypothetical protein	Machinery gene
HPV225_RS06955 (HPV225_1493)	-	1441362..1442114 (+)	753	WP_000767493.1	exodeoxyribonuclease III	-
HPV225_RS06960 (HPV225_1494)	-	1442111..1442746 (-)	636	WP_000668047.1	outer membrane protein	-
HPV225_RS06965 (HPV225_1495)	-	1442750..1443094 (-)	345	WP_000837009.1	hypothetical protein	-
HPV225_RS06970 (HPV225_1496)	recG	1443176..1445041 (+)	1866	WP_001158385.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54908.81 Da
• Isoelectric Point: 6.6984

>NTDB_id=46739 HPV225_RS06945 WP_000751673.1 1439745..1441184(+) (comH) [Helicobacter pylori v225d]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHQMPSLNAPIQKPQNKPTSSQQSLQNFSYLESKLGFKNPKNSLLQPLAT
PNISPANEVKTPTNDTKPPLKPSSQDQENNFFVTPPTEKTPPNNTPNADINEHNESNENNENRDNVEKQAIKDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQIEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDTVKESSEYKEWVKNHVRLKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=46739 HPV225_RS06945 WP_000751673.1 1439745..1441184(+) (comH) [Helicobacter pylori v225d]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAGCCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTTCATCGCAACAAT
CTCTTCAAAACTTTTCTTACCTAGAGTCCAAACTAGGCTTTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTAGCCACT
CCTAATATAAGCCCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCCTTCTTCACAAGATCA
AGAAAACAACTTCTTTGTAACGCCACCCACTGAAAAAACGCCCCCTAACAACACCCCTAACGCTGATATTAATGAACACA
ATGAAAGCAATGAGAATAATGAGAATAGGGATAATGTGGAAAAACAAGCCATTAAAGATCCTAATATCAAAGAATTTGCA
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TTTCTGTCCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCCAGAGCGCGAAAAGACGGCACGACTAGGCAATGTTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCTGTATATGAGCGCCCCAAACAAGACGATC
AGATAGAGCCGACTTTCTATGAAACCAGCGAATTAGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATACAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTGAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.079	100	0.916