Detailed information NTG0046720

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HPKB_RS07215
• Genome accession: NC_017354
• Coordinates: 1483617..1485056 (-)
• Length: 479 a.a.
• NCBI ID: WP_000751665.1
• Uniprot ID: -
• Organism: Helicobacter pylori 52
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1478617..1490056

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPKB_RS07190 (HPKB_1424)	recG	1479757..1481622 (-)	1866	WP_001158368.1	ATP-dependent DNA helicase RecG	-
HPKB_RS07195 (HPKB_1425)	-	1481704..1482051 (+)	348	WP_000837038.1	hypothetical protein	-
HPKB_RS07200 (HPKB_1426)	-	1482055..1482690 (+)	636	WP_000668077.1	outer membrane protein	-
HPKB_RS07205 (HPKB_1427)	-	1482687..1483439 (-)	753	WP_000767504.1	exodeoxyribonuclease III	-
HPKB_RS07215 (HPKB_1429)	comH	1483617..1485056 (-)	1440	WP_000751665.1	hypothetical protein	Machinery gene
HPKB_RS07225 (HPKB_1430)	dnaA	1485277..1486644 (-)	1368	WP_000380604.1	chromosomal replication initiator protein DnaA	-
HPKB_RS07230 (HPKB_1431)	-	1486796..1487332 (+)	537	WP_000922953.1	purine-nucleoside phosphorylase	-
HPKB_RS07235 (HPKB_1432)	-	1487379..1487618 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HPKB_RS07240 (HPKB_1433)	glmS	1487619..1489412 (+)	1794	WP_000334407.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54907.78 Da
• Isoelectric Point: 6.8744

>NTDB_id=46720 HPKB_RS07215 WP_000751665.1 1483617..1485056(-) (comH) [Helicobacter pylori 52]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNAPIQKPQNKPTPSQQSLQNFSYTESKLGSKNPKNSLLQPL
ATPNKISSANEVKTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNNTPNANINEHDESNENRDNGEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRIDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTIRQCYLIEEPLKQAWESEYEITTQLVKATYERPKQDDQTEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=46720 HPKB_RS07215 WP_000751665.1 1483617..1485056(-) (comH) [Helicobacter pylori 52]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACACTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCACACCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTCCATCAC
AGCAATCTCTTCAAAACTTTTCTTACACAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAATAGCCTTTTACAACCTTTA
GCCACTCCTAATAAAATAAGCTCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACTCCTAACGCTAATATTA
ATGAACACGATGAAAGCAATGAAAATAGGGATAATGGGGAAAAACAAGCCATTAGAGATCCTAATATCAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGACGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCATTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTCCATAAAACAGAGCCTTTAGAAGAGCCACAAACCTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGAGCCAGAGCGCGAAAAGACGGCACGATTAGGCAATGCTATCTCATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCACTTATGAGCGCCCCAAACAAGACGATC
AAACAGAGCCGACTTTCTATGAAACCAGCGAATTGGCCTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACACCCTTGAGTATTGAAAATTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.902	100	0.929